Pseudomonas protegens Cab57: PPC_4442
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Entry
PPC_4442 CDS
T03613
Symbol
mnmC
Name
(GenBank) bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_4442 (mnmC)
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
PPC_4442 (mnmC)
Transfer RNA biogenesis [BR:
ppro03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPC_4442 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
GIDA
FAD_binding_3
FAD_binding_2
Pyr_redox
Pyr_redox_2
3HCDH_N
FAD_oxidored
HI0933_like
AlaDh_PNT_C
Lycopene_cycl
Pyr_redox_3
RskA
Motif
Other DBs
NCBI-ProteinID:
BAO63789
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All DBs
Position
4970860..4972836
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AA seq
658 aa
AA seq
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MIPELPHAQLDWDDQGRPRSRVFDDVYFSSESGLDETRHVFIEQNRLGQRFAALADGERF
VIGETGFGTGLNFLCAWQLFQQQAPTGARLHFVSVEKYPLSPADLQRALALWPELASFSA
PLLQQYVAVHGGFQRIVLEGGRVTLTLLIGDALEQLPQLDAQVDAWFLDGFAPAKNPDMW
TAELFAELARLAAPGSTISTFTSTGWVRRLLNSAGFKMKRTPGIGHKWEVLRGEFLGWPE
DAPAPARARPWFARPALREKTALVIGGGLAGCASAASLAARGWQVQLLERHAELAREASG
NPQGVLYLKLSAHGTALSQMILSGFGYTRRQLEHLQRGQDWDGCGVLQLAFNAKEAERQA
QLAAAFPADLLHLLDQPQAQARAGIGLEHGGLFYPEGGWVHPPALCQWQASHPRIQVLAH
REVLELRRVDEQWQAWDGDRMLASAAVAILAGAAEIKRFPASADLPLKRIRGQITRLPQT
AQSQSLATVVCAEGYVAPARLGEHTLGASFDFKSQDLTPTSAEHAGNLEMLREISGDLLH
RLGAEQLPLDSLQGRAAFRCTSPDYLPIVGPLADPLAFAETYAALGKDARQVPDLPCPWL
DGLYINSGHGSRGLITAPLSGELLAAWLENEPLPLPRSVAEACHPNRFALRRLIRGKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgaactgccccacgcccagctcgactgggacgaccaaggacgcccgcgctcg
cgggtcttcgacgatgtgtacttctccagcgaatcgggcctggatgaaacccgccacgtg
ttcatcgaacagaaccgcctgggccagcgctttgccgccctggccgatggcgaacgcttc
gttatcggtgaaaccggcttcggcaccgggctgaactttctctgcgcctggcagttgttc
cagcaacaggccccgactggtgcccggctgcatttcgtcagtgtggaaaagtaccccttg
agccccgccgacctgcaacgggccctggccctgtggccggaactggcgagcttctctgca
ccgctgctgcagcagtacgtggcagtgcatggcggcttccagcgcatcgtgctggagggc
gggcgagtgaccctgaccctgctgatcggcgatgccctggagcaactgccgcaactggac
gcccaggtcgatgcctggtttctcgacggtttcgcaccggccaagaaccctgacatgtgg
accgccgagctcttcgccgaactggcgcgcctggccgccccaggttccactatcagtacc
ttcaccagcaccggctgggtacgccggctgctgaacagtgccggcttcaagatgaaacgt
accccgggcatcggccacaaatgggaggtactgcgaggcgagttcctcggctggccggag
gatgcgccggcgccggccagggccaggccctggttcgcccgccccgcactgcgagagaag
accgccctggtgatcggcggcgggctggccggttgtgccagcgccgccagcctggccgcc
cgcggctggcaggtgcaattgctggagcgtcatgcagagctggcccgggaggcctcgggc
aatccccagggcgtgctctacctaaagctctcggcccacggcaccgctctgtcgcagatg
atcctcagcggcttcggctatacccggcgccaactggagcatttgcagcgcggccaggac
tgggatggctgcggcgtgctgcaactggccttcaacgccaaggaagccgagcgccaggcc
caactggccgcggcttttcccgccgacctgctgcacctgctggaccaaccccaagcccag
gcccgggccggtatcggccttgagcacggaggcctgttctaccccgaaggtggctgggtg
catccgccggccctgtgccaatggcaggccagccacccgaggatccaggtcctggcacac
cgggaagtcctggaactgcgccgggtcgatgagcaatggcaagcctgggacggcgaccgg
atgctggccagcgccgcagtggcgatcctcgccggtgcggccgagatcaagcgcttcccg
gccagcgccgacctgcccctcaagcgcattcgcgggcagatcacccgcctgccccagacc
gcacaaagccagagcctggccacggtggtctgcgccgaaggctacgtcgcccccgcgcgc
ctgggggaacacaccctgggcgccagtttcgacttcaagagccaggacctgacccccacc
agcgccgagcatgccggcaacctggagatgctgcgggaaatctccggcgacctgctgcac
cgcctgggtgccgagcaactgcccctggacagcctgcaaggccgcgcagccttccgctgc
accagcccggactacctgcccatcgtcggccccctggcggacccgcttgcctttgccgaa
acctacgccgccctgggcaaggatgcgcgccaggtgccggacctgccctgcccctggctc
gacggcctgtacatcaacagtggccacggttcacgtgggctgatcaccgcgccgctgtcc
ggcgagctgctggccgcctggctggaaaacgagcccctgcccctgcccagaagcgtggcc
gaagcctgccatccgaaccgttttgccctgcgtcgcctgattcgcggcaaggcctga
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