Pseudomonas protegens Cab57: PPC_5057
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Entry
PPC_5057 CDS
T03613
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00470
D-Amino acid metabolism
ppro00550
Peptidoglycan biosynthesis
ppro01100
Metabolic pathways
ppro01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPC_5057 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPC_5057 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPC_5057 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
PPC_5057 (ddl)
Enzymes [BR:
ppro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PPC_5057 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
Precursor biosynthesis
Amino acid ligase
PPC_5057 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
GARS_A
ATPgrasp_YheCD
ATP-grasp_5
TTL
Motif
Other DBs
NCBI-ProteinID:
BAO64404
LinkDB
All DBs
Position
complement(5620028..5620984)
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AA seq
318 aa
AA seq
DB search
MIAAYANLFSTVKPSDFGRVAVLYGGKSAEREVSLKSGKAVLEALQSGGVNAFGIDVGDD
LLQRLLSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGISTPRHAVLSSEADCISAVAELGLPLIVKPAHEGSSIGMAKVTSAPELIDAWKAAST
YDSQVLVEQWIQGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLDSS
KEQELMELTAKACEALGIAGWARADVMQDAQGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAASLEARG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgcctacgccaacctgttctctaccgtgaaaccgagcgatttcggtcgcgtc
gccgttctttacggtggcaagagcgccgagcgcgaagtgtcgctcaagtccggcaaggcc
gtgcttgaagcgctgcagagcggcggtgtgaacgccttcggcatcgacgtcggcgatgat
ctgctgcagcggctcttgagcgagaagatcgatcgtgccttcatcattctccacggtcgt
ggcggtgaagacggcagcatgcaagggctgctggagtgcctggggattccttacaccggc
agcggcatcctcgcttcggccctggccatggacaaactgcgtaccaagcaggtctggcac
agcctgggcatttcgacgccgcgtcacgcggttctgagttcggaagccgactgtatttcc
gcggtggcggaactgggcctgcctttgatcgtcaaaccggctcatgaaggctccagtatc
ggtatggccaaggtgacttccgcgcccgaattgatcgacgcatggaaggcggccagtacc
tacgattcgcaagtgttggtcgagcaatggatccagggtccggagttcaccatcgcgacc
ctgcgtgaccaggtgctgccacccatcgccctgggcactccccacacattttacgactac
gacgccaagtatctggcttccgatacccagtaccggatcccgtgcgggctcgacagctcc
aaggaacaggaactcatggaactcacggcgaaagcctgtgaggcgctcggtatcgccggt
tgggcacgtgccgacgtgatgcaggacgcccaggggcagttctggttcctggaagtgaat
accgctccgggcatgaccgatcacagtttggttccgatggcggcccgcgcggccggcctg
gatttccagcaactggtattggccatcctggcagccagtcttgaggcgagaggttaa
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