Pseudomonas protegens Cab57: PPC_5064
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Entry
PPC_5064 CDS
T03613
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00300
Lysine biosynthesis
ppro00550
Peptidoglycan biosynthesis
ppro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPC_5064 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPC_5064 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
PPC_5064 (murE)
Enzymes [BR:
ppro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PPC_5064 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
Precursor biosynthesis
Amino acid ligase
PPC_5064 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
BAO64411
LinkDB
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Position
complement(5628496..5629959)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGAKFDGRAHIADALQRGAAAVA
YEVEGATVLPLTDVPLIPVKGLAAQLSDIAGRFYGDPSRQLNLVGVTGTNGKTSVTQLVA
QALDLLGQRCGLVGTLGTGFHGALQSGMHTTPNPIAVQASLADLKNAGAKAVAMEVSSHG
LDQGRVAALAFDVAVLTNLSRDHLDYHGTMEAYGAAKAKLFAWNDLRCRVINLDDDFGRQ
LAADKHESRLITYSLEDAAAYLYCREARFDDDGVRATLVTPQGEHHLRSCLLGRFNLSNV
LAAVGALLGLEYALDEILAVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLLAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRSEDPAQIFDDIRAGF
SAAEKVEFVAGRGLAIARLIASASADDVVVLAGKGHEDYQEINGQRHDFSDLAEADKALT
AWEVGHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacaagattttcgcccacgccggtcgcgatctgctgattcgtgag
ttgaccctggacagccgtaacgtgcgggccggggacctgtttcttgcagtgcccggcgcc
aagttcgatgggcgtgcgcacattgccgatgccctgcagcgcggcgctgcagcggtggct
tatgaagtggaaggggcaactgtgttgccgctgaccgatgtaccgctgattccggtcaag
ggcctggcggcgcagctgtcggacatagccgggcgcttctatggtgacccgagccgccag
ttgaacctggtgggcgtgaccggcaccaacggcaagaccagcgttacccaactggtggct
caggccctggatctgctgggccagcgttgtggcctggtgggtaccctggggaccggattt
catggcgcgctgcaaagcgggatgcacaccacgccgaacccgattgccgtgcaggccagc
ctggcagacctgaagaatgcaggagccaaggcggtggccatggaggtctcgtcccatggc
ctggatcaggggcgcgtggcggcactggctttcgatgtggcggtgctgaccaacctgtcc
cgtgaccatctggattaccacgggaccatggaagcctatggcgcagccaaggccaagctc
tttgcctggaacgacctgcgttgccgggtgatcaacctcgacgacgattttggccggcaa
ctggcggcggacaaacatgagtcacgactgatcacttacagcctcgaagacgccgctgct
tatctgtactgccgcgaagcgcgttttgacgatgatggcgtgcgcgcgaccctggtgacc
ccgcagggtgagcaccacctgcgcagttgcctgctcgggcgcttcaacctgagcaacgtg
ctggctgcggtaggtgcgttgttgggtcttgaatacgcgctggacgaaattcttgcggtc
ctgcccaagcttgaaggccccgccggacgcatgcagcgcctgggtggcggtactcagccg
ctggtggtggtggattacgcccacaccccggatgccctggaaaaagtcttgctggccctg
cgtccgcacgccaagggccgcctgctgtgcctgttcggttgtggcggcgaccgggaccgc
ggcaagcgtccgttgatggctgaggtggtcgagcgtctggccgacggcgtgctggtgact
gatgacaacccgcgcagcgaagacccggcccaaatcttcgacgatattcgtgccggtttc
agcgcggcagaaaaggtggaattcgtagccggtcgcgggttggccattgctcgcctgatc
gcttccgcgtcggctgatgacgtggtggtgctggccggtaaaggccatgaggattaccag
gaaataaacggccagcgacatgatttttctgatctcgccgaggcggacaaagccttgacc
gcgtgggaggtgggccatgcttaa
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