Paroceanicella profunda: FDP22_13905
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Entry
FDP22_13905 CDS
T06319
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00630
Glyoxylate and dicarboxylate metabolism
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01120
Microbial metabolism in diverse environments
ppru01200
Carbon metabolism
Module
ppru_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FDP22_13905
Enzymes [BR:
ppru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
FDP22_13905
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QDL92783
UniProt:
A0A5B8G2E7
LinkDB
All DBs
Position
complement(3112039..3113502)
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AA seq
487 aa
AA seq
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MLDDKKTELRGKERYRAGVLKYAQMGYWDGDYTPKDTDLIALFRITPQEGVDPIEAAAAV
AGESSTATWTVVWTDRLTACDQYRAKAYRVDQVPGTPGQYFVYIAYDLILFEEGSIANLT
ASIIGNVFSFKPLKAARLEDMRLPVAYVKTFKGPPTGIVGERERLDKFGKPLLGATTKPK
LGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNRAQAETGEVKG
HYLNITAGTMEEMYRRAEFAKELGSVIVMVDLIIGYTAIQSISEWCRQNDMILHMHRAGH
GTYTRQKNHGISFRVIAKWLRLAGVDHLHCGTAVGKLEGDPPTVQGYYNVCREIRNEVDL
ARGIFFEQDWGDIRKVMPVASGGIHAGQMHQLLDLFGDDVVLQFGGGTIGHPMGIQAGAT
ANRVALEAMVLARNEGRDIAAEGPEILRAAAKWCKPLEAALDTWGNISFNYTPTDTSDFV
PDMTPAL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgacaagaaaaccgaactgcgtggcaaggaacgctaccgcgccggcgtgctg
aaatatgcccagatgggctactgggacggtgattacaccccgaaggacactgacctgatc
gccctcttccgcatcacgccgcaggagggggtggacccgatcgaggccgccgcggccgtg
gccggcgaaagctccaccgccacctggaccgtggtctggaccgaccggctcaccgcctgc
gaccagtatcgcgccaaggcctaccgggtggaccaggtgccgggcacgccggggcagtat
ttcgtctacatcgcctatgacctgatcctgttcgaggaaggctccatcgccaacctcacc
gcctcgatcatcggcaacgtgttctccttcaaacccctgaaggcggcgcggctggaggac
atgcgcctgccggtggcctatgtgaaaaccttcaagggcccgcccaccggcatcgtgggc
gagcgcgagcggctcgacaagttcggcaagccgctgctgggcgccacgacgaagcccaag
ctgggcctgtcgggcaagaactacggccgcgtggtctacgaggggctgaagggcgggctc
gacttcatgaaggatgacgagaacatcaactcgcagcccttcatgcactggcgcgaccgg
ttcctctactgcatggaggcggtgaaccgcgcccaggccgagaccggcgaggtgaagggc
cattacctcaacatcaccgccggcacgatggaggagatgtaccgccgcgccgagttcgcg
aaggaactgggatcggtgatcgtgatggtcgacctcatcatcggctacactgccatccag
tccatctccgaatggtgccggcagaacgacatgatcctgcacatgcaccgcgccggccac
ggcacctacacccggcagaagaaccacggcatctccttccgcgtcatcgcgaaatggctg
cggctggcgggggtggaccacctgcactgcggcaccgccgtgggcaagctggagggcgac
ccgcccaccgtgcagggctactacaacgtctgccgcgagatccgcaacgaggtggacctc
gcccgcggcatcttcttcgagcaggactggggggacatccgcaaggtgatgccggtggcc
tcgggcggcatccacgccggccagatgcaccagcttctggacctcttcggcgatgacgtg
gtgctgcagttcggcggcggcaccatcggccacccgatgggcatccaggccggagccacg
gcaaaccgcgtggcgctggaggcgatggtgctcgcccgcaacgagggccgcgacatcgca
gccgagggcccggagatcctccgcgccgccgcgaaatggtgcaagccgctggaggccgcc
ctcgatacctggggcaacatctccttcaactacacgcccaccgacacgtcggacttcgtg
cccgacatgacccccgccctgtaa
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