Pan paniscus (bonobo): 100991060 Help Entry 100991060         CDS       T02283                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism pps  Pan paniscus (bonobo) Pathway pps04151   PI3K-Akt signaling pathway pps04510   Focal adhesion pps04512   ECM-receptor interaction pps04611   Platelet activation pps04820   Cytoskeleton in muscle cells pps04926   Relaxin signaling pathway pps04933   AGE-RAGE signaling pathway in diabetic complications pps04974   Protein digestion and absorption pps05146   Amoebiasis pps05165   Human papillomavirus infection pps05205   Proteoglycans in cancer pps05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:pps00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100991060 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100991060 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100991060 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100991060 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     100991060 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     100991060 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     100991060 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     100991060 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100991060 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     100991060 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     100991060 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100991060 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pps00536]     100991060 (COL1A1) Glycosaminoglycan binding proteins [BR:pps00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100991060 (COL1A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  100991060 NCBI-ProteinID:  XP_003817507 Ensembl:  ENSPPAG00000001294 LinkDB All DBs Position 17:complement(44274349..44291764) Genome browser AA seq 1464 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPR GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGP RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP QGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD KGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP PGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA EGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP RGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSF LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKD KRHVWFGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII DVAPLDVGAPDQEFGFDVGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagag tcacccaccgaccaagaaaccaccggcgtcgagggacccaagggagacactggcccccga ggcccaaggggacccgcaggcccccctggccgagatggcatccctggacagcctggactt cccggaccccccggaccccccggaccccccggaccccctggcctcggaggaaactttgct ccccagctgtcttatggctatgatgagaaatcaaccggaggaatttccgtgcctggcccc atgggtccctctggtcctcgtggtctccctggcccccctggtgcacctggtccccaaggc ttccaaggtccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccga ggtccccctggtccccctggaaagaacggagatgatggggaagctggaaaacctggtcgt cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggc ctccctggaatgaagggacaccgaggtttcagtggtttggatggtgccaagggagatgct ggtcctgctggtcctaagggtgaacctggcagccctggtgaaaatggagctcctggtcag atgggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt gctcgtggaaatgatggtgctactggtgctgccgggccccctggtcccaccggccccgct ggtcctcctggcttccctggtgctgttggtgctaagggtgaagctggtccccaagggccc cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggt gctgctggccctgctggaaaccctggtgctgatggacagcctggtgctaaaggtgccaat ggtgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc cagggccccggcggccctcctggtcccaagggtaacagcggtgaacctggtgctcctggc agcaaaggagacactggtgctaagggagagcctggccctgttggtgttcaaggaccccct ggccctgctggagaggaaggaaagcgaggagctcgaggtgaacccggacccactggcctg cccggaccccctggtgagcgtggtggacctggtagccgtggtttccctggcgcagatggt gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa ggatctcctggtgaagctggtcgtcccggtgaagctggtctgcctggtgccaagggtctg actggaagccctggcagccctggtcctgatggcaaaactggcccccctggtcctgccggt caagatggtcgccccggacccccaggcccacctggtgcccgtggtcaggctggtgtgatg ggattccctggacctaaaggtgctgctggagagcccggcaaggctggagagcgaggtgtt cccggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga ccccctggccctgctggtcccgctggcgagagaggtgaacaaggccctgctggctccccc ggattccagggtctccctggtcctgctggtcctccaggtgaagcaggcaaacctggtgaa cagggtgttcctggagaccttggtgcccctggcccctctggagcaagaggcgagagaggt ttccctggtgagcgtggtgtgcaaggtccccctggtcctgctggtccccgaggggccaac ggtgctcccggcaacgatggtgctaagggtgatgctggtgcccctggagctcccggtagc cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccaggg cctaagggtgacagaggtgatgctggtcccaaaggtgctgatggctctcctggcaaagat ggcgtccgtggtctgaccggccccattggtcctcctggccctgctggtgcccctggtgac aagggtgaaagtggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga gaccgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgac ggccaacctggtgctaaaggcgaacctggtgatgctggtgctaaaggcgatgctggtccc cctggccctgccggacccgctggaccccctggccccattggtaatgttggtgctcctgga gccaaaggtgctcgcggcagcgctggtccccctggtgctactggtttccctggtgctgct ggccgagtcggtccccctggcccctctggaaatgctggaccccctggccctcctggtcct gctggcaaagaaggtggcaaaggtccccgtggtgagactggccctgctggacgtcctggt gaagttggtccccctggtccccctggccctgctggcgagaaaggatcccctggtgctgat ggtcctgctggtgctcctggtactcccgggcctcaaggtattgctggacagcgtggtgtg gtcggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggt gaacctggcaaacaaggtccctcaggagcaagtggtgaacgtggtccccctggtcccatg ggcccccctggattggctggaccccctggtgaatctggacgtgagggagctcctggtgcc gaaggttcccctggacgagacggttctcctggcgccaagggtgaccgtggtgagaccggc cccgctggaccccctggtgctcctggtgctcctggtgcccctggccccgttggccctgct ggcaagagtggtgatcgtggtgagactggtcctgctggtcccgccggtcctgtcggccct gttggcgcccgtggccccgccggaccccaaggcccccgtggtgacaagggtgagacaggc gaacagggcgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct ggccctcctggctctcctggtgaacaaggtccctctggagcctctggtcctgctggtccc cgaggtccccctggctctgctggtgctcctggcaaagatggactcaacggtctccctggc cccattgggccccctggtcctcgcggtcgcactggtgatgctggtcctgttggtcccccc ggccctcctggacctcctggtccccctggtcctcccagcgctggtttcgacttcagcttc ctgccccagccacctcaagagaaggctcatgatggtggccgctactaccgggctgatgat gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag cagatcgagaacatccggagccccgagggcagccgcaagaaccccgcccgcacctgccgc gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa ggctgcaacctggatgccatcaaagtcttctgcaacatggagactggtgagacctgcgtg taccccactcagcccagtgtggcccagaagaactggtacatcagcaagaaccccaaggac aagaggcatgtctggttcggcgagagcatgaccgatggattccagttcgagtatggcggc cagggctccgaccctgccgatgtggccatccagctgaccttcctgcgcctgatgtccacc gaggcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag actggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgcgcc gagggcaacagccgcttcacctacagcgtcactgtcgatggctgcacgagtcacaccgga gcctggggcaagacagtgattgaatacaaaaccaccaagacctcccgcctgcccatcatc gatgtggcccccttggacgttggtgccccagaccaggaattcggcttcgacgttggccct gtctgcttcctgtaa

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