Podospora pseudocomata: QC762_406840
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Entry
QC762_406840 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QC762_406840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_406840
Enzymes [BR:
ppsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QC762_406840
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QC762_406840
DNA repair and recombination proteins [BR:
ppsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QC762_406840
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
87910043
NCBI-ProteinID:
XP_062743836
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All DBs
Position
4:complement(2822239..2823865)
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AA seq
386 aa
AA seq
DB search
MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ
GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQTSYSSLYRDTDTRVETWPPKYTKFHLTTTC
NPAVEVAFTDYRRLARVRLVDCPGADIRSHAPLKENGPDPVQDTDRFTLAYFQSKCRASR
AAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQRCNHLTDAQTKTLYEVIRYVCQTAVG
VLGDYHQFPSDWLFKYRWSKGSENPTLPGGEPLAHVTVGNRTSCYATRLQKITLDGVPVV
VEEEKNKEEVVEEEDGGRQEEKKPAPKGRKRKAEWGSTDMPKPKARRGRRAAVKKTEEEE
QEEEEEEEGVKPSKPVAKRGRKALMR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagatagctgaagtcgcgcgcatcgtgcactttctgcgtctacatctcgtcggc
aagaccatcagaaccgcgtccgctgtcgacgaccaaattgtctttggcaaggcgggcacg
accggcgacgcagtttcggctgccttgaccgggaggaaggtcatctcctccgggtcgcaa
ggcaagctattttggcttgtccttgataaggctccgcatgtggtgatgcattttggcatg
acgggttggcttcagattaggggcgtccaaacatcctactcgtccctttaccgggacacg
gacacacgcgtcgaaacctggcctcccaaatacacaaaattccacctcacgaccacctgc
aaccccgcggtggaagtggctttcaccgactatcggcgcctggctagagttcgtctcgtg
gactgccccggcgctgacattcgcagccatgctcctctcaaagaaaacggccccgaccct
gtgcaagacacggacaggtttacgcttgcgtacttccagtccaagtgtcgcgccagtcgc
gccgcggtcaaagctatgcttctcaaccaaaagttcatcagcgggatcggaaactgggtc
ggtgacgaggtgctgtttcagtcccggatccacccagagcagagatgcaaccatctcacc
gacgcgcagactaagactctgtacgaggtgatccgatacgtttgtcagacagctgttggc
gtgctcggtgactatcaccagttcccctctgattggcttttcaagtatcgatggagcaag
ggctcggagaaccctacactccctgggggagaaccgttggctcacgtcacagttgggaac
cggacaagctgctatgctactcgcttgcagaagattactcttgacggtgttcctgtggtc
gttgaggaggaaaagaacaaggaggaggtggtggaggaggaggatggggggaggcaggag
gagaagaagccagcgccgaaggggaggaagcgcaaagccgagtgggggtctacggacatg
ccaaaacccaaggctagacgtggccggcgcgccgctgtcaaaaaaaccgaggaggaggag
caggaggaggaggaggaggaggagggtgtcaaaccttccaagccagttgccaagcgggga
agaaaggcgctgatgaggtga
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