Podospora pseudocomata: QC762_609920
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Entry
QC762_609920 CDS
T09797
Symbol
PRP22
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_609920 (PRP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_609920 (PRP22)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC762_609920 (PRP22)
Spliceosome [BR:
ppsd03041
]
Complex C
Other components
Step II factors
QC762_609920 (PRP22)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
AAA_16
TsaE
ABC_tran
Herpes_ori_bp
PhoH
RimM
Motif
Other DBs
NCBI-GeneID:
87912574
NCBI-ProteinID:
XP_062741275
LinkDB
All DBs
Position
6:3814552..3818495
Genome browser
AA seq
1169 aa
AA seq
DB search
MDDLESLELLSLVSKITSELQNHLGVSEKTLAEFLIAQRLECDSLDGFKAKLASVGASDF
PPSLVDSIDRLVRTMHPKFKGQQNRTNDDSSQRHDRSAEETTKVFKGLAIPDKEVEVEAI
DDTFAMLESLAPKLSNGNQERPPRKRSRTPDDRREDSRRKRKDRYRSRSRSRSRSPQRGR
QRIDRYRDDDNAYRRPPPRDLDDTPQLNKVYDGHVTGVKDFGAFVNIHGVKGKVDGLVHI
SAFGQRVNHPEDVVTRGQNVKVKVVKIEGNRVGLSMKDIDQETGVDMAPQIRMGSGANMM
ALGGGPTGGNDPTGSFMATAIARQQKKRMTSPERWEIRQMIAAGIAKASDYPDLEEEYKS
TLDGTGQMELEEDVDIEIRDEEPPFLAGQTKQSLELSPIRVVKAPDGSMNRAAMAGTNLA
KERKEMKQQEAEEQQQKTKVDLSQWQDPMANPENRQFASDLRRRAQATQAESDSVPEWKR
AVVPKDQPTGKRSDMTIKEQRESLPVFAFREQLINAVRENQVLIVVGETGSGKTTQLTQY
LAEAGFTSNGIIGCTQPRRVAAVSVAKRVSEEVGCRLGEEVGYTIRFEDVTSPATKIKYM
TDGMLEREILIDPELGRYSVIMLDEAHERTIATDVLFALLKKTMKSRKDLKVIVTSATLD
ADKFSEYFNACPIFTIPGRTFPVEILYSREPESDYLDAALTTVMQIHLSEPMGDILLFLT
GQEEIDTSCEILFERMKALGPSVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNI
AETSITIDHIYYVIDPGFVKQNAYDPKLGMDSLIVTPISQAQANQRAGRAGRTGPGKCFR
LYTEAAYQSEMLPTTIPEIQRQNLSNTILMLKAMGINDLIRFDFMDPPPVNTMLTALEEL
YALGALDDEGLLTRLGRKMADFPMEPSLSKVLISSVDKGCSDEVVSIVAMLNLSTIFYRP
KDKQNQADQKKAKFHDPHGDHLTLLNVYNSWKNHGFSSTWCHENFIQARSMRRAKDVRDQ
IVKIMNRHRHPIVSCGRETDRVRQALCSGFFRNTARKDPQEGYKTLTEGTPVYLHPSSAL
FGKQAEWVIYHTLVLTTREYMHFTTAIEPKWLIDAAPTFFKLAPTDKLSKRKAAERIQPL
HNRYGGEDDWRLSAQKRGGRGGGGGGTWG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttggagtccctcgagctgctttcgctcgtttccaagatcacgtcggaattg
caaaaccatctaggcgttagcgaaaaaacattggccgagttcctcatcgcccagcgcctc
gaatgcgattctctcgatggcttcaaggccaagctggcctcggtcggtgccagcgacttc
ccgccgagtttggtcgatagcatagacaggctagtcaggactatgcatccaaagttcaaa
ggacaacagaaccgaaccaacgacgacagcagccagcgccatgatcgatccgccgaagag
actaccaaggtcttcaaagggctcgcgattcccgacaaggaggtagaagtggaagctatc
gatgacacattcgctatgctcgagagccttgcgccaaaactatcgaatggcaatcaagaa
agaccgccgaggaaacgaagcagaacaccagatgaccgccgcgaggactcgaggcgaaaa
cgcaaggacaggtacaggtcacggtccagatcccgatcgaggtctccacaacgaggacgg
cagagaattgaccgctaccgagacgacgacaatgcgtatcgacggccacctccccgcgat
ctcgacgatactccacagctcaacaaggtgtacgacggtcatgtcacaggtgtaaaggac
tttggcgcttttgtcaacattcatggtgtgaaggggaaggttgacggcttggtgcacatc
tcggcgtttggtcagcgagtcaaccacccagaagatgtcgtgacgcgagggcaaaatgtc
aaggtcaaagttgtcaagatcgagggcaacagggtaggcttgtcaatgaaggatatcgac
caggagacaggcgtggatatggcgccccaaataaggatgggatcgggcgccaatatgatg
gccctgggtggtggaccaacaggaggaaacgacccgacaggttcgttcatggcgactgct
attgcccggcaacagaagaagagaatgacctcgcctgaaagatgggagattcgacaaatg
attgctgctggaattgcaaaggcctcagactacccagatttggaggaagagtacaagtca
acccttgacggtacagggcagatggagttggaagaggacgtcgacatcgagatacgtgac
gaagaacccccatttctggccggacagaccaaacagtctctcgagctatcacccatccgc
gttgtcaaggccccagatggctccatgaatcgtgccgctatggccggcaccaaccttgcc
aaggaaagaaaggagatgaagcagcaggaagccgaagaacagcagcaaaaaacaaaggtc
gatttgtcccaatggcaggatccaatggctaatcccgagaaccgacaatttgctagcgac
ttgcgacggcgtgcccaggcaacccaagcagagtctgattctgtgcccgaatggaagagg
gccgtggtgcccaaggatcagcccacgggcaaaaggtccgacatgaccatcaaggagcag
cgagagtctttgcctgtcttcgctttcagggaacaactgatcaacgctgtcagagagaac
caagttctgattgtcgttggtgaaactggctccggaaaaaccactcagcttacccaatac
ctcgccgaggccggctttaccagcaatggcattattggctgcacgcagcctcgtcgtgta
gctgccgtttcggttgccaagcgtgtctctgaggaggttggctgtcgactgggtgaggag
gtcgggtacacaatcagattcgaggatgtaaccagcccggcgacgaagatcaagtacatg
acggacggcatgttggaacgtgagattttgatcgaccctgaactggggagatactcagtc
atcatgttggacgaagcacacgagcgtactattgccactgacgttctgtttgctttgttg
aagaagaccatgaagagccggaaggacctcaaggtcatcgtcaccagtgctacgttggat
gccgataaattcagcgaatacttcaatgcctgtcccatctttaccattccaggacgaacc
ttccctgtcgagattctctactctcgtgaaccggaatctgattatctcgatgctgcgctg
acgaccgtcatgcaaatccacctgagcgaacccatgggtgatattcttcttttcttgaca
ggtcaagaagagatcgacacgtcctgtgagattttgtttgaacgcatgaaagcactagga
ccgtcagtgccggaactcatcattctccctgtttactctgcccttcccagcgaaatgcag
agtaggattttcgaccctgcaccgcctggcagccgaaaggtcgtcattgctaccaatatt
gccgaaacgtcgattacgattgatcatatttactatgtcatcgatcctggtttcgtcaaa
caaaacgcctatgatcccaaactcggcatggactcgctcatcgtcacccctatctcccaa
gcgcaggcaaatcagcgagcaggtcgcgccggccgcacaggacccggcaagtgcttccgg
ctgtacaccgaagcagcctaccagtccgagatgcttccgacgactattcccgaaatccaa
agacaaaacttgtccaacactatcctcatgctcaaggccatgggcatcaacgaccttatc
cgctttgactttatggatcctccacccgtcaacactatgcttacagccttggaggagctt
tatgccctaggagcactggacgacgaaggtctgctgactcgcctcgggcgaaaaatggcc
gacttccccatggagccttctctttccaaggtcttgatctcctcagtcgataagggttgt
tcggatgaagttgtgagcattgttgccatgctcaacctcagcaccatcttttaccggcca
aaagacaagcaaaaccaagcggaccagaagaaggccaagttccacgacccacacggcgac
catctgacactgttgaacgtgtacaactcgtggaagaatcacggcttctcttcaacctgg
tgtcacgagaacttcattcaggcccgttcgatgcgccgtgccaaggatgtgcgggatcag
atcgtcaagatcatgaatcgtcatcgtcaccccatcgtcagctgtggacgcgagacagac
agggtccgccaagctctctgcagcggtttcttccgcaacacagcccgcaaggaccctcag
gagggatacaagacattgacagaaggcacacccgtgtacctgcacccgagctccgcgctg
ttcgggaagcaggcggaatgggtgatttaccacacgttagtgctcaccaccagggagtac
atgcacttcaccacggcgattgagcccaagtggcttattgacgcggcgcctaccttcttc
aagttggcaccaacagacaagctgtcgaagaggaaggcggcagaaaggatacagccgctc
cataaccggtatggcggggaggatgattggcgtctcagcgctcagaagagaggaggcagg
ggtggtggtggtggtggaacatggggttag
DBGET
integrated database retrieval system
