Pseudomonas pseudoalcaligenes: BN5_3629
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Entry
BN5_3629 CDS
T03772
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BN5_3629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_3629
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BN5_3629
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BN5_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
CDM42181
UniProt:
W6R739
LinkDB
All DBs
Position
3760601..3760843
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AA seq
80 aa
AA seq
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MARKKAAPDFEHSLAELQTLVERLESGELSLEDSLTAFEQGIGLTRECQAALAQAEQKVQ
ILLERDGELQPAPFDTDEPA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaaagccgcccccgacttcgaacactccctcgccgaactgcagacgctg
gtcgagcgcctggagagcggcgagctgtcgctggaagactcgctgactgctttcgagcag
ggcatcggcctgacccgtgaatgtcaggccgccctggcccaggccgagcagaaggtgcag
attctgctcgagcgcgacggtgagttgcagcccgcccccttcgacacggacgagcccgca
tga
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