Pseudomonas psychrotolerans: BJP27_03280
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Entry
BJP27_03280 CDS
T05074
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppsl
Pseudomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_03280
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJP27_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_50
HTH_23
HTH_28
HTH_20
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_7
HTH_22
HTH_29
IclR
AAA_7
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APQ10575
LinkDB
All DBs
Position
complement(728672..730549)
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AA seq
625 aa
AA seq
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MPSAQAHHHARAIDQALRAPLRSLSPPGRILESWRRSFEQHHLDPGCLHGPRILSRYELR
QHQQAAEDFLRVADGELGALHARVEAADYCVLLADAQGHTLDYRVSDRLDDECRRAGLYL
GTCWSEQEEGTCGVAAVLTDRAPVTVHKADHFRVAFTGLTCTAAPVFAPGGELLGVLDVS
APRSPDDRRSQLLIQQFTRDSAQRIENAYFMHSARGDWVLCGHAQASYLETQPEFLLAWD
ASGRLTGLNRPARHLCLSQLGYLPQRLDELFGRDAAARLREDDAEPLRLGEARFHGRVRP
PRPRLGAIIPLVRTSAEPEQELRVTRALDTAVRLYRHGLPILVTGETGTGKEVFARALHA
GGDRAARPFVALNCAALPESLIESELFGHAPGAFTGAQRQGRDGLIVAADGGTLFLDEIG
DMPLALQTRLLRVLAEGEVLPVGSARPRRVDVRLVCATHRNLTERVAAGLFREDLLYRLN
GAVFQLPPLRERADRLALARRLLAEECADRPAPDLAPQVQEAILAHDWPGNVRELRNVLR
YAGALCEGTLITLDHLPASLRPEQPLASEPEPQLDSPERRAILAALVRHRWKAVPAARAL
GISRATLYRRLKLYGIAMPHRQPEG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcccaggcgcaccaccacgcccgtgccatcgaccaggccctgcgcgcgccg
ctgcgcagccttagcccgcccgggcgcatcctcgaatcctggcgccgctccttcgagcag
caccacctcgatccgggctgcctgcacggcccgcgcatcctctcgcgctacgaactgcgc
cagcaccagcaggcggcggaggatttcctgcgcgtcgccgacggtgagctgggcgccctg
catgcgcgggtggaggcggccgactactgcgtgctgctggccgatgcccagggtcacacc
ctggactaccgggtaagtgatcgcctggatgacgaatgccgccgcgccggcctctacctg
ggcacctgctggtccgagcaggaggagggcacctgcggcgtcgcggcggtgctcaccgac
cgggcgccggtgacggtgcacaaggctgatcactttcgcgtcgccttcaccggcctcacc
tgtaccgccgcaccggtgttcgccccgggtggcgaactgctcggggtgctggacgtctcg
gcgccgcgttcaccggacgaccgccgcagccagttgctgatccagcagttcacccgcgac
agcgcccagcgcatcgagaacgcctatttcatgcacagtgcccgcggcgactgggtactc
tgcggccatgcccaggccagctacctggagacccagccggaattcctgctggcctgggac
gccagtggtcgcctgaccggtctcaaccgcccggcgcggcacctctgcctgagccagctc
ggctacctgccgcaacgcctcgacgagttgttcggccgtgacgccgcggcccggctgcga
gaggacgacgccgagcccctgcgcctcggcgaggcgcgcttccatggacgcgtcaggccg
ccgcgtccgcgcctgggcgcgatcatccccctggtgcgcaccagcgccgagcccgaacag
gagctccgcgtcacccgcgccctggacaccgccgtgcgtctctatcgccacggcttgccg
atcctggtcaccggcgagaccggcaccggcaaggaagtcttcgcccgcgccctgcatgcc
ggtggcgaccgggcggcccggcccttcgtcgctctcaactgcgcggccctgcccgagagc
ctgatcgagagcgaactcttcggccatgcccccggtgccttcaccggggcccagcgccag
ggccgcgacggcctgatcgtggcggccgatggtggcaccctgttcctcgacgagatcggc
gacatgcccctggccctgcagacccggctgctgcgggtgctggccgagggcgaggtattg
ccggtaggcagcgccaggccgcgacgggtggacgtgcgcctggtctgcgccacccaccgg
aatctcaccgagcgagtggccgccgggctgtttcgtgaagatttgctttatcgcctcaat
ggcgccgtcttccagttgcccccgttgcgcgaacgcgccgaccgcctggccctggcgcgg
cggctgttggcggaggagtgcgctgaccgccccgcgccggacctggcgccccaggtgcag
gaggccatcctggcccacgactggccaggcaacgtgcgcgagctgcgtaacgtgctgcgc
tatgccggcgcgctctgcgagggcaccctcatcaccctcgaccacctgccggccagcctg
cgcccggagcagccgctggccagcgagccggagccccagctcgacagccccgaacggcga
gcgattctcgctgccctggttcgccaccgctggaaggccgtccccgccgcccgggcgctc
ggtatctcccgggccaccctctatcggcggctaaagctttacggtatcgccatgccgcat
cggcagccggagggctga
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