Podospora pseudopauciseta: QC763_609920
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Entry
QC763_609920 CDS
T09815
Symbol
PRP22
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_609920 (PRP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsp03041
]
QC763_609920 (PRP22)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC763_609920 (PRP22)
Spliceosome [BR:
ppsp03041
]
Complex C
Other components
Step II factors
QC763_609920 (PRP22)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
SLFN-g3_helicase
AAA_16
ABC_tran
TsaE
Herpes_ori_bp
PhoH
RimM
Motif
Other DBs
NCBI-GeneID:
87935157
NCBI-ProteinID:
XP_062763578
LinkDB
All DBs
Position
6:3952941..3956883
Genome browser
AA seq
1169 aa
AA seq
DB search
MDDLESLELLSLVSKITSELQNHLGVSEKTLAEFLIAQRLECDSLDGFKAKLASVGASDF
PPSLVDSIDRLVRTMHPKFKGQQNRTNDDSSQRHDRSAEETTKVFKGLAIPDKEVEVEAI
DDTFAILESLAPKPSNGNKERPPRKRSRTPDDRREDSRRKRKDRYRSRSRSRSRSPQRGR
QRNDRYRDDDDSYRRPPPRDLDDTPQLNKVYDGHVTGVKDFGAFVNIHGVKGKVDGLVHI
SAFGQRVNHPEDVVTRGQNVKVKVVKIEGNRVGLSMKDIDQETGVDMAPQIRMGSGANMM
ALGGGPTGGNDPTGSFMATAIARQQKKRMTSPERWEIRQMIAAGIAKASDYPDLEEEYKS
TLDGTGQMELEEDVDIEIRDEEPPFLAGQTKQSLELSPIRVVKAPDGSMNRAAMAGTNLA
KERKEMKQQEAEEQQQKTKVDLSQWQDPMANPENRQFASDLRRRAQATQVESDSVPEWKR
AVVPKDQPTGKRSDMTIKEQRESLPVFAFREQLINAVRENQVLIVVGETGSGKTTQLTQY
LAEAGFTSNGIIGCTQPRRVAAVSVAKRVSEEVGCRLGEEVGYTIRFEDVTSPATKIKYM
TDGMLEREILIDPELRRYSVIMLDEAHERTIATDVLFALLKKTMKSRKDLKVIVTSATLD
ADKFSEYFNACPIFTIPGRTFPVEILYSREPESDYLDAALTTVMQIHLSEPMGDILLFLT
GQEEIDTSCEILFERMKALGPSVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNI
AETSITIDHIYYVIDPGFVKQNAYDPKLGMDSLIVTPISQAQANQRAGRAGRTGPGKCFR
LYTEAAYQSEMLPTTIPEIQRQNLSNTILMLKAMGINDLIRFDFMDPPPVNTMLTALEEL
YALGALDDEGLLTRLGRKMADFPMEPSLSKVLISSVDKGCSDEVVSIVAMLNLTTIFYRP
KDKQNQADQKKAKFHDPHGDHLTLLNVYNSWKNHGFSPTWCHENFIQARSMRRAKDVRDQ
IVKIMNRHRHPIVSCGRETDRVRQALCSGFFRNTARKDPQEGYKTLTEGTPVYLHPSSAL
FGKQAEWVIYHTLVLTTREYMHFTTAIEPKWLIDAAPTFFKLAPTDKLSKRKAAERIQPL
HNRYGGEDDWRLSTQKRGGRGGGGGGTWG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttggagtccctcgagctgctttcgctcgtttccaagatcacgtcggaattg
caaaaccatctaggcgttagcgaaaaaacactggccgagttcctcatcgcccagcgcctc
gaatgcgattctctcgatggcttcaaggccaagctggcctcggtcggtgccagcgatttc
ccgccgagtttggtcgatagcatagacaggctagtcaggactatgcatccaaagttcaaa
ggacaacagaaccgaaccaacgacgacagcagccagcgccatgatcgatccgctgaagag
actaccaaggtcttcaaagggcttgcgattcccgacaaggaggtagaagtggaagctatc
gatgacacattcgccattctcgagagccttgcgccaaaaccatcgaatggcaataaagaa
agaccgccgaggaaacgaagcagaacaccagatgaccgccgcgaggactcgagacgaaaa
cgcaaggacaggtacaggtcacgatccagatcccgatcgaggtctccacaacgaggacgt
cagagaaatgaccgctaccgagacgacgacgattcgtatcgacggccacctccccgcgat
ctcgacgatactccacagctcaacaaggtgtacgacggtcatgtcacaggtgtaaaggac
tttggcgcttttgtcaacattcatggtgtgaaggggaaggttgacggcttggtgcacatc
tcggcgtttggtcagcgagtcaaccacccagaagatgtcgtgacgcgagggcaaaatgtc
aaggtcaaagttgtcaagattgagggcaacagggtaggcttgtcaatgaaggatatcgac
caggagacaggcgtggatatggcaccccaaataaggatgggatcaggtgccaatatgatg
gctctgggtggtggaccaacaggaggaaacgacccgacaggttcgttcatggcgactgct
attgcccggcagcagaagaagagaatgacctcgcctgaaagatgggagattcgacaaatg
attgctgctggaatcgcaaaggcctcagactacccagatttggaggaagagtacaagtca
acccttgacggtacagggcagatggagttggaagaggacgtcgacatcgagatacgtgac
gaagaacccccatttctggccggacagaccaaacagtctctcgagctatcacccatccgc
gttgtcaaggccccagatggctccatgaatcgtgccgctatggccggcaccaaccttgcc
aaggaaagaaaggagatgaagcagcaggaagccgaagaacagcagcaaaagacaaaggtc
gatttgtcccaatggcaggatccaatggctaatcccgagaaccgacaatttgctagcgac
ttgcgacggcgtgcccaggcaacccaagtagagtctgattctgtacccgaatggaagagg
gccgtggtgcccaaggatcagcccacgggcaaaaggtccgacatgaccatcaaggagcag
cgagagtctttgcctgtcttcgctttcagggaacaactgatcaacgctgtcagagagaac
caagttctgattgtcgttggtgagactggctccggaaaaaccactcagcttacccaatac
ctggccgaggccggctttaccagcaatggcattattggctgcacgcagcctcgtcgtgta
gctgccgtttcggttgccaagcgtgtctctgaggaggttggctgtcgactgggtgaggag
gtcgggtacacaatcagattcgaggatgtaaccagcccggcgacaaagatcaagtacatg
acggacggcatgttggaacgtgagattttgatcgaccctgaactgcggagatactcagtc
atcatgttggacgaagcacacgagcgtactattgccacagacgttctgtttgctttgttg
aagaagaccatgaagagccggaaggacctcaaggtcatcgtcaccagtgctacgttggat
gccgataaattcagcgaatacttcaatgcctgtcccatctttaccattccaggacgaacc
ttccctgtcgagattctctactctcgtgaaccggaatctgattatctcgatgctgcgctg
acgaccgtcatgcaaatccacttgagcgaacccatgggtgatattcttcttttcttgaca
ggtcaagaagagatcgacacgtcctgtgagattttgtttgaacgcatgaaagcactagga
ccgtcagtgccggaactcatcattctccctgtttactctgcccttcccagcgaaatgcag
agcaggattttcgaccctgcaccgcctggcagccgaaaggtcgtcattgctaccaatatt
gccgaaacgtcgattacgattgatcatatttactatgtcatcgatcctggtttcgtcaaa
caaaacgcctatgatcccaaactcggcatggactcgctcattgtcacccctatctcccaa
gcgcaggcaaatcagcgagcaggtcgcgccggccgcacaggacccggcaagtgcttccgg
ctgtacaccgaagcagcctaccagtccgagatgcttccgacgactattcccgaaatccaa
agacaaaacttgtccaacactatcctcatgctcaaggccatgggaatcaacgaccttatc
cggtttgactttatggatcctccacccgtcaacactatgcttacagccttggaggagctt
tatgccctaggagcactggacgacgaaggtctgctgactcgcctcgggcgaaaaatggcc
gacttccccatggagccttctctttccaaggtcttgatctcctcagtcgataagggttgt
tcggatgaagttgtgagcattgttgccatgctcaacctcaccaccatcttttaccggcca
aaagacaagcaaaaccaagcggaccagaagaaggccaagttccacgacccacacggcgac
catctgacactgttgaacgtgtacaactcgtggaagaatcacggcttctctccaacctgg
tgtcacgagaacttcattcaggcccgttcgatgcgccgtgccaaggatgtgcgggatcag
atcgtcaagatcatgaatcgtcatcgtcaccccatcgtcagctgtggacgcgagacagac
agggtccgccaagctctctgcagcggtttcttccgcaacacagcccgcaaggaccctcag
gagggatacaagacattgacagaaggcacacccgtgtacctgcacccgagctcggcgctg
ttcgggaagcaggcggaatgggtgatttaccacacgttagtgctcaccaccagggagtac
atgcacttcaccacggcgattgagcccaagtggcttattgacgcggcgcctaccttcttc
aagttggcaccaacagacaagctgtcgaagaggaaggcggcagaaaggatacagccgctc
cataaccggtatggcggggaggatgattggcgtctcagcactcagaagagaggaggcagg
ggtggtggtggtggtggaacatggggttag
DBGET
integrated database retrieval system
