Pseudomonas versuta: AOC04_14925
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Entry
AOC04_14925 CDS
T04081
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOC04_14925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_14925
Enzymes [BR:
ppsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AOC04_14925
DNA repair and recombination proteins [BR:
ppsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOC04_14925
Prokaryotic type
AOC04_14925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALE89395
LinkDB
All DBs
Position
complement(3336747..3337439)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPVWKQALREEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNLTPLD
KIKVVILGQDPYHGPGQAHGLCFSVQPGIPVPPSLVNIYKELKRDLNIDIATHGCLQHWA
EQGVLLLNTTMTVERANAASHAKKGWEHFTDCIIQVVSEQQPKLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGNGHFSRTNKFLEQNGLTPIDWKLSPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggatgatcgtataaaacttgaaccggtctggaagcaggctttgcgtgaggag
ttcgaacaaccctatatggcccagttgcgtgaattcctgcgtcaggagcatgccgccggc
aaggaaatttacccgccgggcccgcttatcttcaatgcccttaacctgaccccgctggac
aagatcaaagtcgtcatccttggtcaggacccttatcacggccctggccaggcacatggc
ctgtgtttttcggtccagcccggcattcccgtaccaccctcgctggtcaatatttataaa
gagctcaagcgcgatctgaatatcgatatcgccacccatggctgcttgcagcactgggca
gagcagggggttttactgctcaacaccaccatgacagtggagcgcgcaaacgcggcgtct
cacgccaaaaaaggctgggagcatttcaccgactgcattatccaggtcgtgagcgagcaa
cagcccaagctggtgtttttgttgtggggcgcccatgcgcaaagcaagcagaaattgatc
gatgcgaccaagcatctggtgctgacgtcagtgcatccttcgccgctttccgcttaccga
gggtttatcggtaacggtcatttcagtcgcaccaacaagtttcttgagcaaaacgggttg
accccgatcgactggaaattgtcgccagcttga
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