Pseudomonas versuta: AOC04_15675
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Entry
AOC04_15675 CDS
T04081
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOC04_15675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsy03019
]
AOC04_15675
Enzymes [BR:
ppsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOC04_15675
Messenger RNA biogenesis [BR:
ppsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOC04_15675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-ProteinID:
ALE89536
LinkDB
All DBs
Position
3498776..3500266
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AA seq
496 aa
AA seq
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MTVLKALKKIFGKSEAEPLASASVTPSSITSPRTDAQQPGRSAPAQASVNTPDVQPAPEP
VQIEQPKVAKPRREAAPKPPVIPWKLEDFVVEPQEGKVRFHDFKLAPELMHAIQDLGFPY
CTPIQAGVLGYTLSGRDAIGRAQTGTGKTAAFLISIISQLTQTPPPKERYMGEPRALIIA
PTRELVVQIAKDAADLTKYTDLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQ
RGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKAERQTLLFSATFTEDVMNLAK
QWTTDPAIVEIEALNVASDMVEQHVYAVAGADKYKLLFNLVNDNGWERVIVFANRKDEVR
RIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVIN
FTLPEVPDDYVHRIGRTGRAGASGVSISFAGEDDSYQLPSIEALLGKKISCETPPTELLR
PVVRAVRKPHDPTVTA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaaaaaaatattcggtaaaagcgaggctgagccactcgca
tcagcttcagtgacaccttcgagcatcaccagcccgcgcaccgacgcgcaacagcctggt
cgctctgctcctgctcaagcctcggtgaacactcccgacgtacagcccgctcctgaaccg
gtacagatcgaacaacccaaagttgcaaaaccacggcgtgaagcggcccccaagccgccg
gtcataccctggaaactcgaagacttcgtggtcgaaccgcaagaaggcaaagtccgcttt
cacgacttcaagctcgccccggagctgatgcacgccattcaggatctgggtttcccgtat
tgcaccccgattcaggcaggcgtactgggctataccctcagcggccgtgacgccatcggt
cgcgcccagaccggcaccggcaaaacggccgcattcctgatttcgatcatcagccagctg
acccagaccccgccgcccaaagaacgctacatgggcgaaccgcgcgcgctgatcattgcg
ccgacccgcgagctggtggtgcaaatcgccaaagacgcagccgacctgaccaagtacacc
gacctcaatgtcatgacattcgtcggcggcatggacttcgacaagcagctcaaacagctt
gaagcccgtcattgcgacattctggtagccactccgggccgtctgctggacttcaaccag
cgcggtgaagtgcatctggacatggtcgaagtcatggtgctcgacgaagccgaccgcatg
cttgatatgggttttatcccgcaagtacgccagatcattcgccagaccccgccgaaagcc
gagcgccagacgctgctgttctctgcgaccttcaccgaggacgtgatgaacctggccaag
caatggaccaccgacccggccattgtcgaaatcgaagcgctcaacgtcgccagcgacatg
gtagagcaacacgtttacgcggttgccggggcagacaagtacaagttgctgttcaacctg
gtgaacgacaacggctgggagcgggtcatcgttttcgccaaccgcaaggacgaagtgcgc
cgcatcgaagaacgcctggtgcgtgacggcatcaacgccgcgcaactgtcgggtgacgtg
cctcagcacaaacgcatcaagaccctcgaaggtttccgcgaaggcaagatccgcgtactg
gtggccaccgacgtggcaggtcgcgggattcacatcgacgggatcagccacgtcatcaac
ttcaccctgcccgaagtgccggacgactacgtgcaccgtattggccgtacaggccgggcg
ggcgccagcggtgtctcgatcagttttgccggtgaagacgactcgtatcaattgccgtcg
atcgaagcgttgctgggcaaaaaaatcagctgcgaaacaccgccgaccgaattgctgcga
cctgtagtacgggccgtgcgcaagccccatgatccgaccgtaacggcctga
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