Pseudomonas versuta: AOC04_22425
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Entry
AOC04_22425 CDS
T04081
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC04_22425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsy02000
]
AOC04_22425
Transporters [BR:
ppsy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AOC04_22425
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ALE90790
LinkDB
All DBs
Position
5005334..5006374
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AA seq
346 aa
AA seq
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MHTSLKFTALSLGLMFAANALAATDLTVVSFGGANKAAQVKAFYGPWEAKGDGKIIAGEY
NGEMAKIKAMVDTKSISWDLVEVESPELSRGCDEDMFEPLDPALFGNPEQYVKGAIQTCG
AGFFVWSTVLAYNADKLKTAPTSWADFWDTKTFPGKRGLRKGAKYTLEFALMADGVAPKD
VYKVLASKDGQNRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKES
NLKIVWNGGIYDFDAWAIPKGLSKDKAEVAKKFIAFTLQPQQQSLYSQNIAYGPANKEAM
PLLPAAVQADMPTAPQNIANQVQIDVSFWADNGEQLEQRFNAWAAK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcatacatcccttaagttcacggccttgagtctgggcctgatgttcgcggccaatgct
ctggccgcgaccgatctgaccgtggtgtcgtttggcggcgcgaacaaggcggctcaggtc
aaagctttttacggcccctgggaagccaaaggcgacggcaaaatcatcgccggtgaatac
aacggtgaaatggccaagatcaaggccatggtcgataccaaaagcatttcctgggatctg
gtagaggtcgaatcgccggagctgtcccgcggttgtgatgaagacatgtttgaaccgctg
gacccggctctgttcggtaatcctgagcagtacgtcaaaggggccattcagacctgcggt
gccggcttctttgtgtggtcgaccgtgctggcgtacaacgccgacaaattgaaaactgcg
cccaccagctgggcagacttctgggacaccaagaccttccccggcaagcgcggcctgcgc
aagggcgcaaaatacaccctggaatttgccttgatggccgatggtgtggcacccaaggat
gtgtacaaggtgctggcgagcaaggacggtcagaaccgtgccttcaaaaagcttgatgaa
ctcaagccgagcatccagtggtgggaagcgggcgcacagccgccccagtacctggcttct
ggcgatgtagtcatgagctcggcttacaacggccggatcgcagccgtgcagaaagaaagc
aatctgaagattgtgtggaacggcgggatttacgactttgacgcgtgggccattcccaaa
ggcttgagcaaggacaaggcagaagtggcgaagaaattcatcgccttcaccctgcagccg
caacagcaaagcctgtattcgcagaatatcgcttacggtcctgccaacaaggaggccatg
ccactgttgcctgcagccgtgcaggcagacatgccgaccgctccgcaaaacatcgccaac
caggtgcagatcgacgtcagcttctgggctgacaacggcgagcagctggagcagcgcttc
aacgcttgggctgccaagtaa
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