Pseudomonas putida S16: PPS_3422
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Entry
PPS_3422 CDS
T01570
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00020
Citrate cycle (TCA cycle)
ppt00480
Glutathione metabolism
ppt01100
Metabolic pathways
ppt01110
Biosynthesis of secondary metabolites
ppt01120
Microbial metabolism in diverse environments
ppt01200
Carbon metabolism
ppt01210
2-Oxocarboxylic acid metabolism
ppt01230
Biosynthesis of amino acids
Module
ppt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppt_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPS_3422
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PPS_3422
Enzymes [BR:
ppt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PPS_3422
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AEJ13969
UniProt:
F8G5S0
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All DBs
Position
3844933..3847158
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIIEAFTASADIAVETRDISLAGRILAAFPEQLGAE
KQVGDHLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQGKGFNIPDYADEPATAEE
KESRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMTQG
DFYGSEKAALIEADDSLRIELVGKDGNTTVLKEKTAVKAAEVIDCATMSRKALKAFIAEQ
IADAKASGVLLSVHLKATMMKVSDPIMFGVIVEEFYNDVLAKHAAALAEVGFNANNGIGD
LYARIKDLPAEKQAEIEADIQALYAQRPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNAAGELQDAKAIIPDRCYAGIYQATIEDCKANGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFQIKADGVVRVVDSKGQVVLEQNVEAGDIFRMCQVKDAPIQDWVKLAVNRARL
SNTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTGLDIRILAPVDAIKFSLARIREGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFL
RWDSLGEFLALAASLEHLGNTYDNPRAKVLANTLDQATGKFLDTNKSPSRKVGGIDNRGS
HFYLTLYWAQALAAQNDDAALQARFAPLAKTLTENEETIVAELNAVQGKPADIGGYYAPD
AELTAKVMRPSQTLNSAIAAL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgttccaagatcatctataccttcaccgacgaagcccccgccctcgccact
tactcgctgctgccaatcatcgaagccttcaccgcttcggctgacatcgccgtcgaaacc
cgcgacatctccctggctggccgcatcctcgccgccttcccggagcaactgggcgcagag
aagcaagtaggcgatcacctggcggaactgggccagctggctaccaccccggaagccaac
atcatcaagctgccgaacatcagcgcctcggtaccgcagctgaaagccgcgatcaaggaa
ctgcaaggcaagggcttcaacatccctgactacgccgacgagccggccaccgcggaagag
aaagaatcccgcgcccgctacgaccgcatcaaaggttccgccgtgaacccggtcctgcgc
gaaggcaactccgaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcacccg
cacaagatgggcgcctgggctgccgactccaagtcgcacgttgcccacatgacccagggc
gacttctacggcagcgagaaagccgcactgatcgaagctgacgacagcctgcgcatcgag
ctggtcggcaaagacggcaacaccaccgtactgaaagaaaagactgcggtaaaagctgcc
gaagtcatcgactgcgccaccatgagccgcaaggccctgaaagccttcatcgccgagcag
atcgccgatgccaaggcttccggcgtgctgctgtcggtacacctgaaagccaccatgatg
aaggtctccgacccgatcatgttcggcgtcatcgtcgaagagttctacaacgacgtgctg
gccaagcatgccgccgccctggctgaagttggcttcaacgccaacaacggcatcggcgac
ctgtatgcccgcatcaaggacctgccagccgagaagcaggccgagatcgaagccgacatc
caggccctgtacgcccagcgtccggccctggccatggtcaactccgacaaaggcatcacc
aacctgcacgtgccgagcgacgtcatcgtcgacgcctcgatgccggccatgatccgtgac
tcgggcaagatgtggaacgccgctggcgaactgcaggatgccaaggcgatcatcccggac
cgctgctacgccggcatctaccaggccaccatcgaagactgcaaagccaacggcgccttc
gacccgaccaccatgggcagcgtaccgaacgtcggcctgatggcacagaaggccgaagaa
tacggctcccacgacaagaccttccagatcaaggccgacggtgtcgtgcgcgtggtcgac
agcaaaggccaggtcgttctcgagcagaacgtcgaagccggcgacatcttccgcatgtgc
caggtcaaggacgcgccgatccaggactgggtcaagctggccgtcaaccgtgcccgcctg
agcaacacccctgcagtgttctggctggacccggcccgcgcccacgacggcgtgatgatc
gagaaggtgcagaagtacctgaaggatcacgacaccaccggcctggacatccgcatcctg
gcaccggtcgacgccatcaagttctccctggcccgcatccgcgaaggcaaggacaccatc
tcggtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactg
ggcaccagcgccaagatgctgtcgatcgtgccactgatgaacggcggtggcctgttcgaa
accggcgccggcggttcggcaccgaagcacgtgcagcagctggtggaagagaacttcctg
cgctgggactcgctgggtgaattcctggccctggccgcttccctggagcacctgggcaac
acctacgacaacccgcgcgccaaagtgctggccaataccctggaccaggccaccggcaag
ttcctcgacaccaacaagtcgccttcgcgcaaagttggcggtatcgacaaccgcggcagc
cacttctacctgaccctgtactgggcccaggccctggctgcgcagaacgacgacgctgcc
ctgcaggcacgcttcgcaccactggccaagaccctgaccgagaacgaggagaccatcgtc
gccgagctcaacgccgtccagggcaagccggccgacatcggtggctactacgctccggat
gccgagctgaccgccaaggtgatgcgcccaagccagaccctgaacagcgccattgccgcc
ctgtaa
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