Pungitius pungitius (ninespine stickleback): 119211249
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Entry
119211249 CDS
T07626
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-16 isoform X1
KO
K16499
protocadherin delta 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119211249 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Protocadherins
119211249 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
119211249
NCBI-ProteinID:
XP_037317917
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MIFTQAAEMDHRLSRGSWVPVTGLVVCLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIA
EDLGLDVAKLSARRFRIVSGAKRQYLEVNLENGILFVNEKMDREELCERSPSCFLHLQVV
IENPLELYRVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRS
YQLSANEHFVLNIQTRNDGSKFAELVLDTPLDREQRKRHEMVLTAFDGGSPERCGTALIT
VTVLDANDNVPVFDRSVYRASLVENAPRGTMVLKLNATDLDEGSNGEVTYAFSGHAPLKV
RELFNVDPYTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPE
VILTSVSTPVQEDAPPGTVIAVISVMDRDSGANGNVDCQIPSNVPFQLHSSFKNYYTLVT
SEFLDREAVSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNA
PGASICSVTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLR
NFMILVQARDAGFPPLASNITVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRLVDAGYL
VTKITALDADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVLLVK
DNGQPPLSATVSVVLTVVDSVPESLSDFGDLALSPQPASNVALYLIVSLSTISLIFLVAI
IVLAAIKCYKDRETHSGYKLPPFACCCCGGFQPDPPPEVFKKSNLNLQISSAAKVPTNCM
EVNGNSSLSQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAENAWNAPSRSASV
NNGATTPNELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQY
WTWGTHMRGVKDYKMSPSTSEVRSRPWTPRCTPPPQQQQPSVPPHPHPHPHPHPPPDYHH
NVYIPGTPSGFCTLRPAAQRSDLDVHNAFSTFGKRRRLQMSPQGEAAIINNDLYND
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacaagctgctgaaatggatcacagactttccagaggcagctgggtaccg
gtgactgggctggttgtatgtttgcttctatgtgcgtgcgtcgtggacctggtccttgca
cagattcgttactccatccccgaagagctggagcacggagcttttgtgggcaacattgcc
gaggacctgggcttggacgtggccaagttgtcagcacgtcggtttcgaatagtctccggc
gcaaagaggcagtatttagaagtgaacttggagaatggcattctcttcgtcaacgaaaag
atggacagggaggagctgtgcgaacgaagcccaagctgttttttacatctgcaggtggtc
attgaaaacccattagaactgtacagagtggaagtggagattctagatgtgaacgacaac
tccccgagtttcccatggagcgagttcaatcttgacatcacggagtcggctgcgccgggc
tcctgtttcccgttagagagcgcacaggaccaagacgtgggcaccaactcgctgcgctcc
taccagctgagcgcgaacgagcactttgtactgaatatccagacgcgcaacgacgggagc
aagtttgctgagctcgtgctggacactccgctggaccgggaacagcggaaacggcacgaa
atggtcctgaccgccttcgacggggggtcaccggaacgctgtggcacagccctcataacc
gtcacagtgttggacgcgaacgataacgtgcccgtatttgaccgctcggtttaccgggcg
agtctggtggagaacgcaccgcgggggacgatggtgctgaagctgaacgccacggacctg
gacgagggctccaacggagaggtgacctacgcgtttagcggacacgcacccctcaaggtg
cgcgagctgttcaacgtggacccgtacacgggtgagatccgagtgaagggcattgtggac
tacgagaaagccagtgtgtatgaactctacgtgcaagcaaaggacaggggaccctcggct
gtggctgtgcacagtaaagtgctcgtagacatcctggatgtgaatgacaacgcgcccgaa
gtcatcctcacgtcagtctccactccggtccaggaggacgcgccaccgggcacggtgatt
gctgtcatcagtgttatggaccgggactcgggagcgaacggcaacgttgactgccaaatc
ccgagcaacgtcccctttcaactccattcatcttttaagaactattacactctggtgaca
agcgagtttctggacagggaagccgtgtctgagtacaacatcacactgacagcccgagac
ttgggctccccttcgctctccacgaggaaaaccatcctcgttcaagtgtctgacattaat
gacaaccccccacggttcgctcaaccttcatacacggtttacgttactgagaataatgcc
ccgggcgcttccatttgctccgtaactgcattcgaccccgattctaatcagaacgcctat
ctgtcctactctattctcgagggtcagatccagggcatgcccgtgtccacttacgtctcc
atcaactccgacaacggtaacatctatgcactgcgctcctttgattatgagcaacttaga
aactttatgattctggtgcaggcgcgagacgccggtttcccccccctcgccagcaatatc
acagtcaacgtatttgtcttggaccagaacgacaatgcacccgttatagtgtccccgctc
cccaaaaacggcaccgtggccacggaggtggttccgcggttggtcgacgccgggtatctg
gttaccaaaataacagcgctagacgcggatgcggggcaaaactcgcggctctcctatcag
gtgctgcaggctacagacccggggctgttcagcgtggccctgtacacgggcgaaatccgc
accattcgccgactcgtggaaaaagacgcaacgaggcaaagactggtcctactagtcaag
gacaacgggcagccgccgctctccgccaccgtctccgtggtcctcacggtggtcgacagc
gtgcccgagtccctgtcagatttcggagatctcgcgctcagccctcagcccgcctcgaac
gtcgctctctacctgatcgtgtcactaagcacaatctctttaatattcctcgtggctata
attgtgcttgctgcaatcaagtgctacaaggaccgggagacccacagtgggtacaagctc
cccccgttcgcctgctgctgttgcggggggtttcagccagatccgcctccagaagtgttc
aaaaaatccaacctcaacctacagatttcatccgcggctaaagtgcccacgaactgtatg
gaggtaaatggaaacagcagtctctcccagtcatattgttataaagtgtgcctgactccc
gaatctgccaaaagtgacttcatgtttctgaagccgtgcagccccggcagcacgccgagg
aacaacgaggcgaagagcgcagaaaacgcgtggaacgcgccaagccggagcgcatctgtg
aacaatggagcaactactccaaacgagttgaagcagccaaacacagactggactctgacg
aaaaatcagaactcctccatcaaaagttataactccatcaacatggatggcaccctcatg
cgaaaggccatgcacgccgatccagaaaactatgtcacatccatggcgcccggacaatat
tggacctggggaacccacatgagaggggtgaaagactacaagatgtctccctctacaagt
gaggtccgctctcgcccctggactcctcggtgcactcctcctccccaacagcagcagcca
tcagtcccaccccaccctcaccctcacccacaccctcacccaccccctgactaccaccac
aatgtgtacatccctggaaccccatcgggtttctgcaccctgaggcccgcagcgcagcga
agcgacctggacgtccacaacgctttctccaccttcggcaagagacgacgtcttcagatg
tccccccagggagaggcggcgattataaataatgacctgtacaatgactga
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