Pungitius pungitius (ninespine stickleback): 119217345
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Entry
119217345 CDS
T07626
Symbol
tsku
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119217345 (tsku)
Proteoglycans [BR:
ppug00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
119217345 (tsku)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
119217345
NCBI-ProteinID:
XP_037326734
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All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MERRQDLKKKSTMALLLWFGVSLLASVQSSGVKNCHRDCRCEVESFGLFDSFSLTRVDCR
GLGADTPMPITIPLDTAHLDLSSNALGPLGDTMLAGPGYTTLVSLDLSSNLITKVTPSAL
SKLRYLETLDLSHNRLESLSTSCFAGIPLVEVDLSHNSFQEFDMDVFATKVSGEPVSVDL
SCNELASVSATSRGRVLRVQNLNLSSNRLLSVPRLAGLSLRYLNLDGNPIARVEEGAFAE
LTDMVYLSISGLRELAEVRARAFKSLRSLQVLDLSNNPQLKTLSPAVFSGLDSLQELNLS
GSGVASLPNNMLSNLPSIKSITLGRSVHCWRSQKQAQFHRQLGQVQHDEVLTCDVEGIVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggagagacgacaagacctgaaaaagaagagcacaatggcgctcctcctctggttcggc
gtgtcgctgctggcctccgtccagtccagcggcgtcaagaactgccaccgcgactgccgc
tgcgaggtggaaagcttcggcctgttcgacagcttcagcctgacccgggtggactgccgg
gggctgggagccgacacccccatgcccatcaccatcccgctggacaccgcccacctcgac
ctgtcgtccaacgcgctgggcccgctcggcgacaccatgctggccgggccgggctacacc
accctggttagcttggacctgagcagcaacctcattacaaaggtgacacccagcgctttg
tccaagctgcggtacctggagacgctggacctgagccacaaccgcctggagagcctctcc
accagctgcttcgccggcatccccctggtcgaagtggacctcagccacaacagcttccag
gagttcgacatggacgtgttcgccacgaaggtcagcggggagcccgtcagcgtggacctg
tcctgcaacgagctcgcgtccgtctcggcgacctcgcgcggccgggtgctgcgcgtccag
aacctgaacctgtcgtccaaccggctgctgagcgtgccgaggctggcggggctgtcgctg
aggtacctcaacctggacggtaaccccatcgcgcgcgtggaggagggggcgttcgccgag
ctgacggatatggtctacttgtccatcagcggcctccgcgagctcgcagaggtccgggcg
cgtgccttcaagagcctgcgcagcctgcaggttcttgatctctccaacaacccgcagctt
aagaccctgagcccggccgtcttcagcgggctggactccctgcaggagctgaatttgtcc
ggctccggcgtggcgtccttgcccaacaacatgctgagcaatctgcccagcatcaagagt
atcacgctgggacgaagcgtccactgctggaggagccagaagcaggcacagtttcaccgg
caactgggccaggtccaacacgacgaggtgctgacctgtgacgtggagggcatcgtgttg
tga
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