Pungitius pungitius (ninespine stickleback): 119219893
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Entry
119219893 CDS
T07626
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119219893 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119219893 (usp43b)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119219893 (usp43b)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119219893 (usp43b)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119219893 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
TetR_C_13
Motif
Other DBs
NCBI-GeneID:
119219893
NCBI-ProteinID:
XP_037331274
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MERAKGGTPTTREEKRKDKKPKPGKLFRRKSLKSVGSFMNRIIKTLGTLTHFGDPDARDA
EDDDGGFRNGAPCTLSAGSGSIRGDAHLTRERVVKNPASTSSSLCTGRDKLLHQFADRIP
GVVGLKNHGNTCFMNAVVQCLNNTDLLAEYLGLERYKPDLGHATVRAHGRSAETRPAEGG
EVTERLASLVRALWTLEYTPQLSVDFKTVVSKYGSQFRGNSQHDALEFLLWLLDRVHEDV
HPASHNNNNKTKAPRKGPSGAEEVLFPDPSQSEQLRIQNSFVQEHFQAQYKSSLTCPHCM
KQSNTFDPFLCISLPIPLRQTRWLCVVLVFSTKGQRYLRVGLAVPLFGYVAFLRRMAADE
GRISPDQVILTEVYSTGFQRSFFDEEDLSSIAESDVIYAFQAPPLYIRGGSARISGYHHS
LPSSPYSTGPEGQRLPSSGTVSSEFLNQGAPVKILLLVCNAAGGGQQAVRFGPPFLMRED
RSVSWDQLQQSILSKLYYLMINGAQAQNTRVLFNIRVVGGSAFYSYLSPQDARPLLHPAV
DRALKLCCSGGPPHVKLIIEWEHRIKDCLFGNIQEEVVKDADSVRSQQQHHVQQYSCTLD
ECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLT
TFVHFPLASLDMAPHMVSRGHGPHQPGWTQPRRPDLAPPDFLYDLYAVCNHHGGMHGGHY
TASCRNSVDGQWYGYDDSSAEPVPEADVCTRGAYILFYQRRDTIPPWSASSSVTGSTSSS
ASDHWLVRLAGGSERGSVVSGEPAPLGPIQVPESPELPVFGEDPPRTAETDALATKPFVR
GSRSVSMRSPTKPKETLSRVLPLRWSFGSKDRVRNPAPTQPGELVEYLESGRRPRCTKEP
ITALVASPPQTSAPAHDCSSPSGSSLSHTDRTASDACYSPRVPAGQSRGCVGNRDDGSLK
HRSSKPQPQRGALLMGHVSHSAPPSRESTLRRTKVPTGVTFRTQKDSLQAATQPGDRRGP
GAREGRSHDSLLSFFRPAFMKKDLPRSPAKGHDPRSNGPPERLARGHLAKLSLSNGTLTT
ASCDARGGRGQLLSGRDLQRAHSSSDLQARLDLTFRRCASLQRNGDVAPPPARRYGTLRR
AQHSTTSLVPP
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaagggggggacgccgacgacgcgggaggagaagcgcaaagacaaaaag
ccaaagccgggtaagctcttccgaaggaaatcgttgaagtccgtggggagtttcatgaac
agaataattaaaactttgggcactttgacccactttggagacccggacgcgcgggacgcg
gaggacgacgacggggggttccggaacggcgcgccgtgcaccctcagcgccggctcgggc
tccatcaggggagacgcgcatctgactcgggagcgcgtggtgaagaaccccgcgagcacg
tcctcctccctgtgcaccggccgagacaaactgcttcaccaattcgccgacagaatcccg
ggtgtcgtggggctgaagaaccacggcaacacctgcttcatgaacgccgtggtccagtgt
ctgaacaacacggacctgctcgccgagtacctggggctggagcggtacaagcccgacctc
ggtcacgccacggtgcgcgcgcacgggaggagcgcggagacgcggcccgccgagggggga
gaggtcacggagcggctggcgtcgctggtgagggctctgtggactctggagtacaccccg
cagctgtctgtggactttaagactgtggtgtccaagtacggatcgcagtttcgtggcaac
tcgcagcacgacgccctggagttcctcctgtggctgctggaccgcgtccacgaagacgtc
catccggcctcccacaataacaacaacaagaccaaagctcccagaaagggccccagcgga
gctgaggaggtgctgtttcctgacccctcgcagtccgagcagctccggatccagaacagc
ttcgtccaggaacatttccaggcacagtacaaatcttcactgacgtgcccccactgcatg
aagcagagcaacacctttgacccgttcctgtgcatctcactcccaattcctcttcgccag
accaggtggttgtgtgtggtgctggtgttcagcaccaaaggacagaggtacctgcgggtc
gggctggccgtgcctttgttcggctacgtggccttcctaaggaggatggcggctgacgag
gggagaatttccccagaccaggtgatcctgacagaggtttactccacaggcttccagcgc
tccttcttcgatgaggaggacctgagcagcatagctgagagtgatgtcatctatgccttc
caggctccgcccctgtacatcagaggaggttcggcgcggatctcagggtaccaccacagc
ctcccgtcgtctccatactccactggtcccgagggtcagaggcttccttcgtcggggacg
gtgtcatccgagttcctcaaccaaggcgcccccgtgaagattctgctgttggtgtgcaac
gctgcaggcggcggccagcaggctgtcaggtttggacctccgttcctgatgagggaggac
cgatccgtctcctgggaccagctgcagcagagcatcctcagcaagctgtattacctgatg
atcaatggggcccaggcgcagaacaccagagtgctgttcaacatccgcgtggtgggagga
tcggcgttttacagctacctgtctcctcaggacgcgcggcccctcctccaccccgctgtc
gacagagctctgaagctgtgctgctcaggaggaccaccgcacgtgaagctcatcatcgag
tgggagcacagaatcaaagactgcctgttcggtaacatccaggaggaggtggtgaaggac
gcggacagcgtgaggagtcagcagcagcatcacgtccaacagtacagctgcacgctggac
gagtgcttccagctctacaccaaagaggagcagctggccccggacgacgcctggaagtgc
ccccactgtaagcagctgcagcagggcatggtgaagatgagcctgtggacgctcccggac
atcctcatcctccacctgaagcgcttcaggcaggtgggggagcggaggaacaagctcacc
accttcgtgcatttccccctggcgagcctggacatggcgccgcacatggtgagccgcggc
cacggcccccatcagcccggctggactcagccccgacggccggacctggctcctcccgac
ttcctgtacgacctgtatgccgtgtgcaaccaccacggaggaatgcacggcggacactac
acagcctcctgcaggaactcggtggacggccagtggtacggctacgacgacagcagcgcc
gagccggtgcctgaagcggacgtgtgcacacgtggagcctacatcctattctaccagagg
agggacaccatccccccctggtccgccagttcttcagtcaccggttccaccagctcatcc
gcctccgaccactggctggtccggctggccgggggcagtgagcggggcagcgtggtgtcg
ggggaacctgcgcctctgggtcccatccaggtcccagagtctcctgagctgccagtgttt
ggagaggacccccccagaacagcagagacagatgcgctggcgaccaagccctttgtccgt
gggagcaggagtgtgagcatgaggtcaccaaccaagcccaaggagactctgagcagagtt
ctgcccctgcgctggtcttttggctccaaggaccgcgtgaggaacccagccccgacccag
ccgggggagctggtggagtacctggagtccgggcgccgcccccggtgcaccaaagagcct
ataacagcactggtggcctccccaccacagacgagtgccccggcacacgactgcagctca
cccagcggcagcagtctcagccacaccgacagaaccgcctccgacgcttgttactccccc
agagtgccggcgggacagagccgaggttgtgtcggtaaccgggacgatggctccctgaag
cacaggtcatccaagcctcagcctcagagaggggcccttctgatgggccacgtcagccac
agcgcacctcccagcagggagtccaccctgaggaggaccaaggtgccgacaggggtgacc
ttcaggacgcagaaagactcgttgcaggcggccactcaacccggagacaggagggggccg
ggggctcgggagggccgcagccacgacagcctcctgtctttcttcagacccgctttcatg
aagaaggacctccccaggtccccggccaaggggcacgacccgcgctcaaacggccccccg
gagagactggcgcgcggccatctagccaaactgtccctctccaacgggacgctgaccacg
gccagctgtgacgcccgcggcggcagaggccagctgctcagcgggagggacctgcagcgc
gctcacagctccagtgacctccaggcgaggctggatctgacctttcgcaggtgcgcctcg
ctgcagaggaacggcgacgtggcgccccccccggcccgccgctacggcactctgcggcgc
gcacagcacagcaccacgtcgctggtgccgccgtga
DBGET
integrated database retrieval system
