Pungitius pungitius (ninespine stickleback): 119222862
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Entry
119222862 CDS
T07626
Symbol
shroom4
Name
(RefSeq) protein Shroom4 isoform X1
KO
K18625
protein Shroom
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119222862 (shroom4)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119222862 (shroom4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
PDZ
PCF11_RFEG_rpt
PDZ_6
Motif
Other DBs
NCBI-GeneID:
119222862
NCBI-ProteinID:
XP_037335706
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
METVEQLVSFHHVQVQLSGGAPWGFTLKGGLEHGEPLIITKIEDGGKAALCAKLRVGDEL
VNINGSALYGSRQEALILIKGSYRLLKLAVRRRSVPVLRPHSWHLAKLSEPPLPLPPPPS
PPPPRLPAADSPPLPPPPPPLSAMQLHPGSYPPPWHAADHSDLSLPWGQLSRPYSSTERS
SSLGSMESLDAPPPAAPPSPDSRDSPGDPPLFNNKRDSAYSSFSASSNASDCAAVPLPPG
DAGSMDNLLHAGGDASTPGGAPGEVTPASLKSRSLTRPRARPVQVKERPSSCCYEGGDSV
RKMNPPLPPTRTDSFRATRTRPRGANKRCVSAPVEIAGVPFDFEDVESGTLNGFEGSVQS
GDGEDSSADAVSAATSGRVSDAAAACPRPQEPPVELGADQPGAPSDVSTWDDRDASHDPV
HAPSGQWGGGAAPGDSTGASAPEDAGATLGRDFQPLSAAASVDTLLGGHRESGKGGRSKE
DAAEEADMRKSPASRNHRRNRRRGERFATNLRNEIQRKKAQLQRSRGPGGLLCSGETVQE
EEGPDLSEEGAEPEPPPREGSAAVAFASPAGPPPGGAAGRAQNPEAARAWSDSREDASRT
WSTPRAPNHAPSGTVQILDPGLPDFGVGVRVVEEPAPAGKARRWRWTPEHKLQPEPPARC
GASAHRAAGARHAAGAWCGSSSPSSFSSSSSYAPRPQESDILPFADRMKFFEETSKGASD
PSSRRQKKPLHHPEPRGGEVTQRRYSYQGGGQRDSDPNTVEARRMSVSTERERERVRQWE
REGQREGQREGQREGQREGQREGQREGGEDGARFYGTKERNEDYQRDARPHAPPRDEAPR
SAFHPVRAPPHLPEDQQPPPRGHRARSYTQTEMHPARQQETTTLNRKCSLTERDSSWRRE
SRPPEHHQHHQHHQHHQGPRGSSAPPPAPLSLRGRAMSENDLRFDGGGGGYRWPSVSVAT
SQSLSEVEEGAGGVGGVEAAAANRKKTLPPPRPPPPKWEQFHRRRASHHALFASSPPSLD
AAESRPRSSSCVPPPETSRLRSYSLPPERQEVTEGCPRCSCSRTRDLPNASSNQNQAQMQ
EQRFSHASSNQTQEQRFSHASSNQMQEQRFSHASSNQTQEQRFSHASSNQMQEQRFSHAS
SNQTQEQRFSHASSNQMQEQRFSHASSNQMQEQPFSPALSNQNQAQMQEQRFSHASSNQT
QEQRFSHASSNQTQAQMQEPRLGHASSNQNQAEPLEMSFTVAPPSPMFSRRSFRPVAPPP
KERDQKGMYGEQQERVEVLPSLPPPPAPPAEIAVIRLSEGRGRERVTEKPEARPGAAWNR
DHSDPNGGDSPRESYFSMDHEQRQRRASGGFRSIDGPQKTPEPGTESETTLSPSPAHSLD
ADLDVPMETDIDDFQEDEEAAGAEDGPITSELPCFALPVTVLETDIDTEASPPGSPEGEE
LEEELEEELQAGEAERLSLEELFPQSCEGEPGRESWRGADSLDRRSGASSSCSSYYSTSA
AKAQLLSQMKDFTDNNREEDDELAYKKQLMESLRKKLGVLREAQRGLQEDIRANAQLGEE
VESMVVAVCKPNEVDKFRMFIGDLDKVVSLLLSLSGRLLRVETALETLHPDAELHDRLPL
LEKKHQLMRQLSEAQDLKDHVDRREQAVSRVLARCLSPELHRDYSHFVKMKAALLVEQRQ
LEDKTRLGEEQLRGLRESLGLGMGIGMGMSMGYGHY
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggagacggtggagcagctcgtctccttccaccacgttcaggtccagttgagcgggggc
gcgccctggggcttcaccctgaaaggagggctcgagcacggggagccgctcatcatcacc
aagatcgaggacggagggaaggccgccctgtgcgccaagctgagggtcggcgacgagctg
gtgaacatcaacgggtcggcgctctacggcagccggcaggaggccctcatcctcatcaag
gggtcctaccgcctcctgaagctcgccgtcaggaggcgcagcgttcccgtcctcaggcct
cactcctggcacctggcgaagctgtcggagccgccgctccccctccctcctcccccgtct
cctccccctcctcgcctccccgccgccgactcccctcctctcccccctcctccgcccccc
ctgtctgccatgcagctccaccccggctcctaccccccaccctggcacgcagcggaccac
agtgacctgtccttgccgtggggtcagctgtccagaccgtactcctccaccgagcgaagc
agctccctgggctccatggagagcctggacgcgccgccgcccgccgcgccgccgtccccc
gactcccgggactcgcccggcgacccccccctcttcaacaacaagagggactcggcctac
agctccttctccgccagctccaacgcctccgactgcgccgccgtgccgctgcccccgggg
gacgccggctccatggacaacctcctgcacgccggcggcgatgcctccaccccggggggg
gcgcccggcgaggtgacgcccgcctcgctcaagtccaggtccctgaccaggcccagagcg
aggcccgtccaggtgaaggagaggccctcgtcctgctgctacgagggaggagactctgtg
aggaagatgaaccctcctcttcctcccaccaggacggacagcttcagggcgacccggacc
cggccgcgcggcgccaacaagcgctgcgtctccgctccggtcgagattgccggcgttcct
tttgactttgaggacgtcgagtcggggacgctgaacggcttcgaggggagcgtccaaagt
ggggacggcgaggactcgagtgcagacgccgtctcagcggcgacctcgggtcgcgtctct
gacgcagcggcggcgtgccctcggccgcaggagccgccggtcgagctcggggccgatcaa
cccggggccccctccgatgtctccacgtgggacgaccgggacgcgtctcacgatcccgtc
cacgcgccctcaggacagtgggggggcggcgctgcccctggggactcgacgggggcgagc
gcccccgaggacgccggcgcgacgctggggagggattttcagcctcttagtgctgccgcc
agtgtggacacgttactgggggggcacagggagtcgggtaaaggcgggagaagtaaggag
gacgcggcagaagaggcggacatgaggaagtcgccggcgtccaggaaccatcgccggaac
cgccgccgcggcgagcgcttcgccaccaacctccgcaacgagatccagaggaagaaggcc
cagcttcagaggagccggggcccgggggggctgctctgcagcggggaaaccgtccaggag
gaagaggggccggacctcagcgaggagggggcggagcctgaaccgcctccccgggaggga
agcgccgcggttgcgttcgcctcgcctgctggccccccccccggcggcgccgccggccgg
gcacagaaccccgaggcagcgagagcctggagcgactcgagggaagacgcgtcgcggacc
tggtctacgccccgcgctccaaaccacgccccctccgggaccgtccagatcctggacccg
gggctgccggatttcggggtgggcgtccgggtcgtggaggaaccggcaccggccgggaaa
gcccgccgctggcgctggacccccgagcacaagctccaaccggagcccccggctcggtgc
ggagcctcggcccacagggcggcgggggcgcggcacgccgccggcgcctggtgcggctcc
tcctccccctcctccttctcctcctcctcctcctacgctccccggccgcaggagtccgac
atcctccccttcgccgataggatgaagttcttcgaggagacgagcaaaggcgcgtcggac
ccgtcgagccgcaggcagaagaagcccctccatcacccggagccccgggggggggaggtc
acccagaggaggtactcctaccaggggggggggcagagggacagtgacccaaacactgtg
gaggccaggaggatgtcagtgagcacggagagggagagggagagggtgaggcagtgggag
agggaaggacagagggaaggacagagggaaggacagagggaaggacagagggaaggacag
agggaaggacagagggaaggaggggaggacggcgctcgtttttacggcaccaaagaaaga
aacgaagactatcaacgcgatgcgcggccccacgcgcccccccgagacgaagccccaagg
tcggccttccatcccgtcagagctccgccccacctccctgaggaccagcagccccccccc
cgggggcacagagcgaggagctacacccagacggagatgcatcccgcccggcaacaggaa
acgaccacgctcaacaggaagtgcagcctgacggagagggactccagctggaggcgggag
tccaggcccccagagcaccaccagcaccaccagcaccaccagcaccaccagggtccccgg
ggctcctctgctccgcctccggctcctctgtcgctgcgagggcgggccatgtccgaaaac
gacctccgctttgacggcggcggcggcggctaccgctggccgtccgtgtccgtggcgacc
agccagagcctgagcgaggtggaggaaggggcgggcggagtcgggggggtagaggccgct
gccgctaacagaaagaagacgctgcctccgccaagaccgccgccgcccaagtgggagcag
ttccaccggcgccgtgcgtctcaccacgccttgttcgcctcctctcctccgtccctggac
gccgcagagtcacgcccccgctcctcctcctgcgtccctccacccgagacgtcccgactg
aggtcctacagccttccgccggagagacaggaagtgaccgagggatgcccgcgatgcagc
tgcagccgaaccagggatctgcccaacgcctcgtccaaccagaatcaagcacagatgcag
gagcaacgcttcagccacgcctcgtccaatcagacgcaggaacagcgcttcagccacgcc
tcgtccaatcagatgcaggaacagcgcttcagccacgcctcgtccaatcagacgcaggaa
cagcgcttcagccacgcctcgtccaatcagatgcaggaacagcgcttcagccacgcctcg
tccaatcagacgcaggaacagcgcttcagccacgcctcgtccaatcagatgcaggaacag
cgcttcagccacgcctcgtccaatcagatgcaggagcaacctttcagccccgccttgtcc
aaccagaatcaagcacagatgcaggaacagcgcttcagccacgcctcgtccaatcagacg
caggaacagcgcttcagccacgcctcgtccaatcagacgcaggcacagatgcaggaaccg
cgactcggccatgcttcgtccaatcagaatcaagctgaacccctggagatgagtttcacc
gttgctccgcccagtcccatgttctccaggaggagcttcaggcccgtggccccgccccca
aaagagagggaccagaagggcatgtatggcgaacagcaggagagggtggaggtcttacca
tcgctgcctccgcctcccgctccgccagcagagatcgccgtgatcaggttatccgagggg
aggggccgggaaagggtgacggagaaaccggaggcgagacccggagccgcgtggaacaga
gatcacagcgaccccaacggcggcgactcgccccgggagtcctacttctccatggaccac
gagcagcgccagcgccgcgccagcgggggcttccggagcatcgacgggccccagaagacc
cccgaaccggggacggagtcggagacgaccctcagcccgagccccgcccacagcctggac
gcggacctggacgtccccatggagacggacatcgacgacttccaggaggacgaggaggcg
gcgggggcggaggacgggccgatcaccagcgagctgccttgcttcgcgctgccggtgacg
gtgctggagacggacatcgacacagaggcctcgccgcccggctcgccggagggggaggag
ctggaggaggagctggaggaggagctccaggccggcgaagcggagaggctgagcctggag
gagctcttcccccagagctgtgagggggagccgggccgggagagctggaggggggccgac
agcctggacaggaggtccggtgcgagctccagctgttcgtcttactacagcacgtcagcc
gccaaagctcagctgctgtctcagatgaaggacttcaccgacaacaacagggaggaggac
gacgagctggcctacaagaagcagctgatggagagcctccgcaagaagctgggggtgctg
agggaggctcagaggggactgcaggaggacatcagagccaacgcacagctgggggaggag
gtggagagcatggtggtggcggtgtgcaaacccaacgaggtggacaagttccgcatgttc
atcggggacctggacaaagtggtgagcttgttgctgtcgctgtccggccggctgctgagg
gtggagacggcgctggagacgctgcaccccgacgccgagctccacgaccggctccccctg
ctggagaagaagcatcagctcatgaggcagctgtccgaggcccaggacctgaaggaccac
gtggaccgcagagagcaggccgtgagccgggtgctggcccgctgcctctcccccgagctg
caccgggactacagccactttgtgaagatgaaggccgccctgctggtggagcagaggcag
ctggaggacaagacccggctgggggaggagcagctgagggggctgagggagagcctgggg
ctcgggatggggatcgggatggggatgtcgatgggatacggacattactga
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integrated database retrieval system
