Pseudomonas putida HB3267: B479_00225
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Entry
B479_00225 CDS
T02389
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_00225 (trmE)
Transfer RNA biogenesis [BR:
ppuh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
B479_00225 (trmE)
Prokaryotic type
Methyltransferases
B479_00225 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
SRPRB
Roc
Motif
Other DBs
NCBI-ProteinID:
AGA70963
LinkDB
All DBs
Position
complement(51172..52542)
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AA seq
456 aa
AA seq
DB search
MNTVRETIAAIATAQGRGGVGIVRLSGPLAAKAGQLITGRTLTPRHAHYGPFRDEEGLVL
DEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSSQAARNALRSLQGEFSKRVHFLTDALIALRIYVEAAIDFPEEE
IDFLADGHVLAMLDTVRGELSKVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNQLAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVL
LVVDSTAPEASDPFALWPEFLDQRPDPAKVTLIRNKADLSGERVALEQCDDGHVTITLSA
KGDDAGLQLLRDHLKACMGYEQTAESGFSARRRHLDALRQASEHLEHGRAQLTLAGAGEL
LAEDLRQAQQALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgcgtgaaaccatcgccgccatcgccaccgcccagggccgcggcggtgtg
ggtattgtcaggttgtccggccctctggctgccaaggccggccagttgatcaccggccgt
acgcttaccccgcgccacgcccattacggcccgttccgcgacgaggaaggcctggtgctg
gacgaagggatcgcgctgttcttccccgggccgaattcgttcaccggcgaggacgtgctg
gaactgcagggccacggtggcccggtggtgctggatatgctgctgcagcgctgtgtacag
gttggttgccggctggctcgcccgggtgagttcagcgagcgtgcattcctcaacgacaag
ctcgacctggcccaggccgaagccattgccgacctgatcgaagccagttccagccaagct
gcgcgcaatgccctgcgttcgctacagggggagttctccaagcgcgtgcacttcctgacc
gatgcgttgattgcgctgcgcatctacgtcgaggcggcgatcgacttccctgaagaggaa
atcgacttcctcgccgacggccatgtgctggcgatgctcgataccgtgcggggcgagttg
tccaaagtacagcgtgaagccgggcagggggctttgctgcgtgacggcatgactgtggtc
atcgccggtaggccgaatgctggcaagtcgagcctgctgaaccagctggccgggcgggaa
gcggccatcgtgactgatattgccggcaccacgcgggacatcctgcgcgaacatatccac
atcgacggcatgccgctacacgtggtcgatactgccggtttgcgcgacaccgatgaccat
gtggaaaagattggcgtggaacgtgccctgaaggccattggcgaggcagatcgggtgttg
ttggtggtggactccaccgcgcccgaggccagcgacccgttcgccctgtggccagaattt
ctcgaccagcggccagacccggccaaggtgacgctgattcggaacaaggctgatcttagt
ggtgagcgggtagcgctggaacagtgcgatgacggccatgtaacgatcaccctcagtgcc
aaaggggacgatgcagggctgcagttgctgcgtgaccacctgaaggcctgcatgggttat
gaacagacggccgagagtggcttcagcgctcgccggcgccatctggatgccctgcgccag
gccagtgagcacctggaacatggccgtgcacaactgaccctggctggcgcgggtgagctg
ttggcggaagacctgcggcaggcgcagcaggccctgggggagattaccggggcattcagc
tctgatgacctgctggggcggattttctccagtttctgcatcggcaagtaa
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