Pseudomonas putida HB3267: B479_10620
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Entry
B479_10620 CDS
T02389
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_10620
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
B479_10620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AGA73026
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All DBs
Position
2326678..2327109
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AA seq
143 aa
AA seq
DB search
MDIVDTATRSRMMAGIKGRNTRPEMIVRRFLHANGYRFRLHRRDLPGSPDIVLPRFRTCI
FVHGCFWHRHDGCRYATTPNTRADFWQAKFTQNVERDGRARRALRADGWKVLTIWECELR
SPARILGHVLEFLRVQGEELDNL
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgttgacacggcaacccgatctcgcatgatggctggtatcaaggggcgaaat
acacgacctgagatgatcgtacggcgcttcctccatgccaacggttaccgatttcggctt
catcgccgggaccttccgggaagcccggatattgtactccccagattcagaacctgtata
tttgtccatggatgtttctggcaccgccatgatggctgtcgttacgccactacccccaac
actcgcgcagacttctggcaagcgaaattcacccaaaatgtcgaaagagacggtcgtgcc
aggcgtgcgctcagagcagatggatggaaagtgctcacaatctgggagtgcgagcttaga
agcccggctagaattctcgggcatgtgttggagttcctccgagtccaaggggaggagctt
gacaatctctga
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