Pectobacterium punjabense: E2566_05975
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Entry
E2566_05975 CDS
T06530
Name
(GenBank) SmdA family multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E2566_05975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuj02000
]
E2566_05975
Transporters [BR:
ppuj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E2566_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
T2SSE
AAA_29
AAA_22
AAA_23
AAA_16
NB-ARC
AAA_33
KAP_NTPase
nSTAND3
TsaE
DUF87
AAA_21
cobW
Motif
Other DBs
NCBI-ProteinID:
QJA19500
LinkDB
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Position
1321772..1323541
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AA seq
589 aa
AA seq
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MRLFAQLSWYFRREWRRYLGAVALLIAIAILQLLPPKLVGVIVDGVTQRGMSMAEMMQWI
GVMLLTAVMVYLLRYVWRVFLFGASYQLAVELREDFYRQLSRQHPAFYQRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSMVMGCAVLVVMCTQISWELTLLALLPMPIMALFIKRYGT
QLHNRFKSAQAAFSSLNDQAQESLTSIRMIKAFGLENYQSARFAQVAADAGAKNMHVARV
DARFDPTIYIAVGLSNLLAIGGGSWMVINGSLTLGLLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYGRIRQLLAEDAVVKDGEESLPADRGVLAVNISAFRYPDNTRDALKNIQFTLA
PGNMLGLCGPTGSGKSTLLALILRNFDSQSGEIRYHERPLNAIRLDELRSRFAVVGQMPF
LFSDSVAQNIALGRPNATQQEIEHAARLASVHDDILRLPQGYLTEVGERGVMLSGGQKQR
IAIARALLLDAEILVLDDALSAVDGRTEHQILQNLKTWGEKRTLIISAHRLSALTEANEI
VVLQQGQTVQRGTHRALAAEPGWYRDMYRYQQLEAALDDVPQLEGSKNE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgtttgctcaactaagttggtattttcgccgcgaatggcgtcgctatctgggc
gctgtcgcactactcattgcgattgctattctgcaattactccctccaaaactggttggc
gtgattgtcgatggtgtgacgcaacgcggcatgtcgatggccgaaatgatgcagtggatt
ggcgtgatgctactgaccgccgtcatggtctatctgctgcgctatgtgtggcgtgtattc
ctgtttggggcctcataccagttggcggtcgagttacgagaagatttttaccgccagtta
agccgccagcatcctgcattttatcaacgccaccgtactggcgatctcatggcgcgcgcg
actaacgatgtcgatcgcgtggtatttgctgccggcgaaggcgtgttgacactggttgat
tcgatggtgatgggctgtgctgtgctggtggtcatgtgtacgcagattagttgggagctc
actttgctggcgctgctcccgatgcccatcatggcacttttcatcaaacgttatggcacc
caactgcataaccgttttaaatccgcacaggcggcattttcttcgcttaacgatcaggcg
caggaaagtttgaccagtattcggatgattaaagcctttgggttggaaaactatcaatct
gcacgtttcgcgcaggttgccgcggatgctggcgctaaaaatatgcacgttgcccgagtc
gatgcccgcttcgatcccacgatttatattgccgtcgggctgtcgaatttgctggcgatt
ggcggcggcagttggatggtgatcaatggttcgctgacattaggcttgttgaccagtttt
gtcatgtatctgggattgatgatatggccgatgctggcgctggcctggatgtttaatatt
gttgaacgcggtagtgcggcatatggccgtattcgacagctactcgcggaagacgctgtg
gtgaaagacggtgaggagtcattgcctgccgatcggggcgtgttggcagtgaatatctcc
gcgtttcgctatcctgataatacccgcgatgctttaaaaaatattcaatttaccttggct
ccgggcaatatgttggggctatgcgggccgacaggttcgggaaaaagtacgctgctagcc
ctgatcttgcgtaatttcgatagccaatcgggagagattcgttatcacgagcgtccattg
aatgccattcgcttggatgagctcaggagccgttttgccgttgtcggacaaatgcctttt
ttgttctcggattcggtggcacaaaatattgcactgggtcgcccgaatgccacgcagcag
gagattgaacatgcggcacggcttgcgagtgtgcatgatgatattttgcgtttgcctcag
ggttacctgacagaagttggcgaacgcggcgtgatgctctctggcggtcaaaaacagcga
atcgcgattgcacgagcgctactactggatgctgaaattttggtgctggacgatgcgctg
tctgcggttgatgggcgaacggagcaccagattttgcagaatctcaaaacatggggcgaa
aaacggacgctgatcatcagtgcacaccgcctgtcagccctaaccgaggcgaatgaaatt
gtggtgctgcaacaggggcaaaccgtgcagcgtggcacgcaccgagcgctggcggcagaa
cctggctggtatcgggatatgtatcgttatcaacagctggaggcggcgctggatgatgtg
ccgcagttggaaggatcgaaaaatgaatag
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