Pectobacterium punjabense: E2566_20755
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Entry
E2566_20755 CDS
T06530
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2566_20755 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_20755 (mutM)
Enzymes [BR:
ppuj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E2566_20755 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E2566_20755 (mutM)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2566_20755 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
NFACT_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
QJA22166
LinkDB
All DBs
Position
complement(4551946..4552755)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLVGHTILYAEVRNTRLRWPISAEVLSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNI
ETCSVLAHLGPEPLESEFSADYLYQASRNKKTSIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRTAGSLNENDAAVLVHVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTPIETAKHGQRSTFFCRRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccagtcgtcggggaatttcaccctatctcgttggt
cataccatcctttatgcagaagtgaggaatacgcgcctgcgctggccgatatcggctgag
gttctctcactaagcgatgagccagtgctaagcgtgcgtcgacgggcaaaatacctgctg
attgagcttacgcgtggctggattatcgtgcaccttggtatgtctggtagcctgagggta
ttgccggaatatagcgaaccagaaaagcacgatcatgttgatttggtgatggacagcggt
aaagtgctgcgttacaccgatccccggcgttttggcgcctggctgtggacggataatata
gaaacttgctcggtattggcacatctagggccggagccattagagtcagaattctccgca
gattatctctatcaggcgtcacgaaataaaaaaacgtctataaaacagtggattatggat
aacaaagtggtcgttggcgtaggcaatatttatgcgagtgaatcgctgtttgctgcgggt
atccaccctgatagaacggccggatcgctaaatgagaatgatgcagccgtcttggtgcac
gtgattaaacaggtgttacagctttcgattgagcagggtggcacgacgctgcgtgacttt
ttgcaatcagatggcaagcctggctatttcgcacaggagttgcgggtctatggccgcaac
ggtgaaccttgccgaacatgtggaacaccaatagaaaccgcgaaacatgggcagcgtagc
acattcttttgccgccgttgtcagcgttaa
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