Pandoraea pulmonicola: RO07_16765
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Entry
RO07_16765 CDS
T03553
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppul03012
]
RO07_16765
Translation factors [BR:
ppul03012
]
Eukaryotic type
Elongation factors
RO07_16765
Prokaryotic type
RO07_16765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
bact_SelB_WH_2nd
MMR_HSR1
SRPRB
GTP_EFTU_D3
Motif
Other DBs
NCBI-ProteinID:
AJC21723
UniProt:
A0A378Z2C5
LinkDB
All DBs
Position
1927523..1929460
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AA seq
645 aa
AA seq
DB search
MIVGTAGHIDHGKTSLVRALTGVDTDRLKEEKARGISIELGYAYTPLPDGEVLGFIDVPG
HEKLIHTMAAGAVGIDYALLVIAADDGIMPQTREHLAILTMLGVRRGVVALSKADRVDAA
RLAQVTHDITQYLASTPLARAAIVPVSATTPGDTGVATLREQLTQAMRAMRAMRNAGPAD
STTRAVRRDDAVFRLAVDRVFTLAGHGTVVTGTAFAGTVRVGDTLTVMPQGLPVRVRSIH
AQNRPVEAGRAGERCALNLAGVERDQLGRGDWIVAAGLSQPLKHVDVELHWLEGNAPLTQ
WFPLHVHLGTTHVQARTVLLDGDALAPGGTMRVQLVFDTPVCTMPGDRFIVRNPQATATV
GGGRVLDPAAPERKRRAPARLAWLDAVATFLDGGGLDALLAQSAFGLTGAQVVAITGLPP
EQWQWPSNAVVYAGAENQSLAFAPHVWQTMGARVLDALRDYHARVPDEPGLDVARLGRMT
WPALEASRWRVIVQALLTDGALARTGAWLHLPSHRVEMTDEETALAQALLPRVAQGRFDP
PWVRDMGRELNVHEERVRTVLRKLARQGRVHQIVKDLFYDDACVRALADLIVQADGRVEA
GAFRDATGLGRKRAIQILEFFDRAGYTRRVGHLHVQRPGVVWGAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggtacggcgggacatatcgatcacggcaagacgagcctcgttcgtgcgctg
accggtgtcgacacggaccgtctcaaggaggaaaaggcgcgcggcatttccatcgaactg
ggctacgcgtacacgccgttgcccgacggtgaagtgcttggcttcatcgatgtgccgggg
cacgagaagctcattcatacgatggcggccggcgcggtcggcatcgattatgcgttgctg
gtaattgcggccgacgacggcatcatgccgcagacgcgcgaacatctggccattctcacc
atgctcggtgtgcggcgtggcgtggtggcactgtcgaaggccgaccgcgtcgatgcggcc
cggctcgcgcaggtgacgcacgatatcacgcaatacctcgcgagcacgccgctggcgcgg
gcagccatcgtgccggtgtccgcgacgacgccgggggatacgggcgttgccacgttgcgc
gagcagttgacgcaggcgatgcgggcgatgcgggcgatgcggaatgcgggccccgcggat
tcgaccacgcgcgcggtgcgccgtgacgacgccgtgttccgccttgccgtcgaccgtgtc
ttcacattggcggggcatggcacggtggtgaccggcacggcgttcgcgggcaccgtgcgc
gtgggcgatacgctgacggtcatgccgcaggggctgcccgtacgcgtgcgcagcattcat
gcgcagaatcgcccggtggaggccgggcgcgccggagagcggtgcgccttgaatctcgcg
ggcgtggagcgcgatcagttgggacgcggcgactggatcgtcgcggccgggctgtcgcag
ccgttgaaacatgtcgatgtcgagctgcattggctcgaaggcaatgccccgctgacgcaa
tggtttccgttgcatgtgcatctgggcacgacacacgtgcaggcccgcacggtgctgctc
gacggcgacgccctcgcgcccggtggcacgatgcgcgtgcaattggtgttcgacacgccg
gtctgtacgatgcccggcgatcgcttcatcgtgcgcaatccgcaggcgacggcaaccgtg
ggtggcgggcgtgtactcgatcctgccgcgcccgagcgcaagcgccgggcgccggcgcgg
ctggcgtggctcgatgcggtggcaacgttcctcgacggcggggggctcgatgcactgctc
gcgcagtcggcattcggcctgacgggcgcgcaagtggtggcgatcacgggcttgccgccc
gaacagtggcaatggccgtcgaatgccgtggtgtatgcgggcgccgagaaccagtcgttg
gcgttcgccccacatgtctggcaaacgatgggcgcgcgtgttctcgatgcgttgcgcgac
taccatgcgcgcgtgcccgatgagccggggctcgacgtcgcccggctgggacgcatgacg
tggccggcgctggaggcgtcgcgttggcgtgtgatcgtacaggcgttgctgacggacggg
gcgttggcgcgaacgggcgcgtggctgcatctgccgtcgcatcgtgtcgagatgacggat
gaggagacggcgttggcgcaggcgctactgcctcgtgtggcgcaggggcgcttcgatccc
ccttgggtgagggatatggggcgcgagttgaacgtgcatgaggagcgagtgcggacggta
ctgcgcaagctggcgcgtcaggggcgcgtgcatcagatcgtgaaggatctgttctacgac
gacgcgtgtgtgcgggcgctcgccgacctgatcgtgcaggcggacggcagggtcgaggcg
ggagcgtttcgcgacgcgacggggctcgggcgcaaacgtgcgattcagattctggagttc
ttcgatcgtgcgggatatactcgccgcgttggtcatttgcacgttcagcgccccggtgtg
gtgtggggcgctgtgtag
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