Pandoraea pulmonicola: RO07_17940
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Entry
RO07_17940 CDS
T03553
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RO07_17940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_17940
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RO07_17940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AJC21896
UniProt:
A0A378Z1V0
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Position
complement(2182991..2185648)
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AA seq
885 aa
AA seq
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MTPMMQQYMRIKAEHPNMLVFYRMGDFYELFHDDAVKAARLLDLTLTARGQSGGQPIRMA
GVPHHAVEQYLGKLVKLGESAAICEQIGDPATSKGPVERKVVRIVTPGTLTDAALLNDKL
DQYLLAVQIHPARRASERLAGLAWLSLASGELRLMEVPAEKLSRELERIRPAETLLPDSA
AEAFAGFALGSATRVPDWHFDTAAGTQRLRDQLGVASLTAFGCDGLNPALGAAGALLQYA
AATQGQSLRHVQNLNVEREAAYIGLDAATRRNLELTETLRGTESPTLLSLLDTCGTTMGS
RLMRHWLHHPMRDQQVPQSRQLAIATLLEGAGTWRALNSELRHVADVERITARLALLSAR
PRDLSSLRDALRRLPELHTTLRAVEARSPLLAMLHEDLAIPDAALALLTSAIAEEPAAML
RDGGVIARGHDAELDELRDISENCGQFLVDLETRERERTGINNLRVEFNKVHGFYIEVTR
GQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERSLAREKMLYEALLQALLPHI
GEFKRIAQALAQLDVLAALAERAETLGWVKPELVAERVVDIRQGRHPVVEQQVERFIAND
CSLGDARRLLLITGPNMGGKSTFMRQTALIALLAYVGCYVPAEAVRLGPLDAIFTRIGAS
DDLAGGRSTFMVEMTESAAILHTATDQSLVLMDEIGRGTSTFDGLALAWAIARHLLGHNR
CYTLFATHYFELTQLPDEFPQCANVHLSAVEHGEGIVFLHAVQDGPASQSYGLQVAQLAG
VPMPVIRAARKHLALLEQQALDPAAPQLDLFAPRAPAETGEFDDMADGAALPHGAGDDST
QASVDPAAQAALARLAQINPDDLRPREALDLLYELRGLIDGRANG
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatgatgcagcaatacatgcgcatcaaggccgagcacccgaacatgctcgtc
ttctatcggatgggagacttctatgagctgttccacgacgacgccgtcaaggccgcccgt
ctgctcgacctgacgctcaccgcgcgcggccagtccggcggccagccgatccgcatggcg
ggcgtgccgcatcacgcggtcgagcagtatctcggcaagctggtgaagctcggcgagtcc
gcggccatctgcgaacagatcggcgaccccgcgacctccaagggcccggtcgagcgcaag
gtcgtgcgcatcgtcacgcccggcacgctcaccgacgccgccctgctcaacgacaagctc
gaccaatacctgctcgcggtgcagatccacccggcgcggcgcgccagcgagcgacttgcc
ggattggcgtggctctcgctcgccagcggcgagttgcgcctgatggaagtgcccgccgag
aagctgtcgcgcgaactggagcgcatccgcccggccgagacgctgctgcccgacagcgcc
gccgaagcgttcgccggttttgcgctgggctccgcaacgcgtgtgccggactggcacttc
gacaccgccgccggcacgcagcggctgcgcgatcagctcggcgtggcgagcctcaccgcg
ttcggctgcgacggcctgaatcccgcactgggcgcggcgggcgcattgctgcaatacgca
gcggcaacacaaggtcagtcgctgcgtcatgtgcaaaatctgaacgtggagcgggaagcg
gcctatatcgggctcgatgccgcgacgcgccgcaatctcgagctgaccgagacgctgcgc
ggcaccgagtcgccaacgctgctctcgctgctcgacacctgcggcaccaccatgggcagc
cgcctcatgcggcattggctgcatcatccgatgcgcgatcagcaggtgccgcagtcgcgc
cagttggcgatcgccaccctgctcgaaggcgccggcacgtggcgcgcgctcaatagcgaa
ctgcgccatgtcgcggacgtcgagcgcattacggcgcgcctggcgctgctgagcgcacgc
ccgcgcgatctgtcgagcctgcgcgatgcgctgcgccgcctgccggaactgcatacgacg
ctgcgcgccgtcgaagcgcgctcgccgttgctcgccatgctgcatgaggatctggcgatt
cccgacgccgcgctcgccctgctcaccagcgccattgccgaggagccggcggccatgctg
cgcgacggcggcgtcattgcacgcggtcacgatgccgagctcgacgagttgcgcgacatc
tcggagaactgcggccagttcctcgtcgatctggagacgcgcgagcgcgagcgcaccggc
atcaacaatctgcgcgtcgagttcaacaaggttcacggcttctatatcgaagtcacgcgc
ggccagaccgacaaggtgcccgacgactatcgccgccgccagacgctcaagaacgccgag
cgctacatcacgccggaactgaagacgttcgaggacaaggcgctgtccgcgcaggagcgc
tcgctcgcgcgcgagaagatgctctacgaagccctgctgcaggccttgctgccgcacatc
ggcgaattcaagcgcattgcccaggcgcttgcgcaactcgacgtgctcgccgcgctcgcc
gaacgcgcggagacgttgggctgggtcaagcccgagctggtggctgaacgcgtggtcgat
attcgtcagggtcgccatccggtcgtcgaacaacaggtcgagcgcttcatcgccaatgac
tgctcgctcggcgacgcgcgccgactgctgctcatcaccggcccgaacatgggcggtaaa
tcgacgttcatgcgccagaccgcgctcatcgcgctgctcgcctatgtcggttgctacgtg
ccggccgaggcggtccggctcgggccgctcgacgcgatcttcacgcgtatcggcgcctcc
gacgatctcgccggcggacgctcgacgttcatggtcgagatgaccgagtccgccgcgatt
ctgcacaccgccaccgaccagagcctcgtgctgatggacgagatcgggcgcggcacgtcg
actttcgacggactcgcgctcgcctgggcgattgcgcgccacctgcttggccacaaccgc
tgctacacgctgttcgcaacgcactacttcgagctgacgcagctgcccgacgagttcccg
caatgcgcgaacgtccatctctcggccgtggagcatggcgaaggcatcgtcttcctgcac
gccgtacaggacggcccggcgagccagagttacgggctgcaggtcgcgcaactggccggc
gtgccgatgccggtcattcgcgccgcccgcaagcatctcgcgttgctcgaacagcaggcg
ctcgaccccgccgcgccgcagctcgatctgtttgcgccgcgcgcacctgcggagaccggc
gaattcgatgacatggcggatggcgccgcactgccgcatggtgcgggcgacgactccacg
caggcctctgtcgatccggccgcgcaggcggcactggcacgactggcgcaaatcaatccg
gacgatcttcgtccgcgcgaggcactcgacctgctgtacgaactgcgcggcctgatcgac
ggccgggccaacggctga
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