Pandoraea pulmonicola: RO07_21770
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Entry
RO07_21770 CDS
T03553
Name
(GenBank) transcriptional regulator
KO
K15546
XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_21770
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
XRE family
RO07_21770
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SKI
HTH_3
HTH_31
AAA_33
HTH_26
AAA_18
Cytidylate_kin2
HTH_19
AAA_28
HTH_25
AAA_17
AAA_16
ABC_tran
AAA_22
AAA
HTH_7
HU-CCDC81_bac_1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AJC22453
UniProt:
A0A378ZDN9
LinkDB
All DBs
Position
3109940..3110872
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AA seq
310 aa
AA seq
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MPKRPADSLPPDRLSPTNAGDTGDAIAPQLALLARRVRTLRAQRGMTRKQLAAQSGVSLP
YLARVEAGTGNVSLAVLHKLGEALNVGVETLVAERMAYDGDLLILVEYLRQQPAEVLSRL
RRQIVVPAAAEARGKGRRIALIGLRGAGKSTLGPRLAQAFGAPFVELDKEVEREAGIAIG
EVITLYGQAAMRRIERQCIERIIAEHDNVVLATGGGIVSEAQTYERVLRTFRTVWLRARP
DVHFQRVMQQNDARIATEALRNEALEHIHRMLDAREALYQLADVTLDTSDITPDAALAAL
QDTLSPARAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgacctgccgattcccttccgcctgaccgcttgtcgccgaccaatgccggc
gacaccggtgacgcgatcgcgccgcaactcgccctgctggcccggcgcgttcgtacgctg
cgagcccaacgcggcatgacccgcaagcagcttgccgcgcagtccggcgtgtcgctgccc
tatctcgctcgcgtggaagccggcaccggaaacgtctcgctcgccgtgttgcacaaactt
ggcgaagcgctcaacgtcggcgtggagacgctcgtcgccgagcgcatggcgtacgacggc
gacttgttgatcctcgtcgaatatcttcgtcagcagcccgccgaggtgctttcgcgcctg
cgtcgtcaaatcgtggtgcccgcggccgccgaagcgcgcggcaagggtcggcgcatcgcg
ctcatcggactgcggggcgcaggcaaatcgacgctcgggccgcggctcgcgcaggcgttc
ggcgcgcccttcgtcgaactcgacaaggaagtcgagcgggaagcggggatcgcgatcggc
gaagtaatcacgctgtatggacaggccgccatgcggcgcatcgagcgacagtgcatcgag
cgcatcatcgcggaacacgacaatgtggtgctggccacgggcggcggtatcgtgtccgaa
gcccagacctacgagcgcgtgctgcgcacgttccgcacggtatggttgcgcgcccgcccc
gacgtccattttcagcgtgtgatgcagcagaacgatgcgcgcatcgccaccgaggcgcta
cgcaacgaagcgctcgaacacatccaccgcatgctcgacgcgcgcgaagcgctctaccaa
ctcgccgacgtgacgctcgacacgtcggacatcacgccggatgcggcgctcgccgccttg
caggacacgctgtcaccggcacgtgctgcctga
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