Pseudomonas putida NBRC 14164: PP4_08490
Help
Entry
PP4_08490 CDS
T02707
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00470
D-Amino acid metabolism
ppun00550
Peptidoglycan biosynthesis
ppun01100
Metabolic pathways
ppun01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PP4_08490 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PP4_08490 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PP4_08490 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppun01011
]
PP4_08490 (ddl)
Enzymes [BR:
ppun01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PP4_08490 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppun01011
]
Precursor biosynthesis
Amino acid ligase
PP4_08490 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
TTL
ATP-grasp_5
GARS_A
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
BAN52702
LinkDB
All DBs
Position
979682..980638
Genome browser
AA seq
318 aa
AA seq
DB search
MTSAYEKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALTTAGVDVVAIDVGDD
LLTRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASENDCLLASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAK
YDSQVLVEQWIHGPEFTIAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSV
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILADSVTTRG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgcctacgaaaaactgcactcgaccctggacgtcaaggcgttcggccgcgtc
gccgtgctgtacggtggcaaaagcgccgagcgtgaagtgtcgctgaagtccggtgcggca
gtgatcgacgcgctgaccactgccggtgtcgacgtggtcgccatcgacgtcggtgacgac
ctgctcacgcggctgcaaagcgaaaagatcgaccgcgccttcatcatcctgcacggccgt
ggcggtgaagacggcagcatgcaaggcctgctggagtgcctgggcatcccttacaccggc
agtggcatccttgcctcggcgctggccatggacaagctgcgcaccaagcaggtgtggcag
agcctgggcattccgaccccgcgtcacgcggtgttggcgagcgaaaacgattgtttgttg
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggctctagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggacgccgccaaa
tacgattcccaggtactggtggaacagtggatccacggcccggagttcaccatcgcggtc
ttgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcatcccgtgcgggctggatagcgtc
aaggaacaggaactgatcgacctgaccgcacgcgcctgtgatgccatcggcatcgaaggc
tgggggcggctggacgtgatgcaggacgagcagggccggttctggctgctcgaagtcaac
accgcaccgggcatgactgatcatagcctggtgccaatggcggcccgcgcggctggcctg
gacttccagcaactggtgctggcaatcctggctgatagcgtgacgacgcgaggttaa
DBGET
integrated database retrieval system