Pseudomonas sp. UW4: PputUW4_00147
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Entry
PputUW4_00147 CDS
T02357
Symbol
gabT1
Name
(GenBank) 4-aminobutyrate transaminase
KO
K14268
5-aminovalerate/4-aminobutyrate aminotransferase [EC:
2.6.1.48
2.6.1.19
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00250
Alanine, aspartate and glutamate metabolism
ppuu00310
Lysine degradation
ppuu00650
Butanoate metabolism
ppuu01100
Metabolic pathways
ppuu01120
Microbial metabolism in diverse environments
Module
ppuu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PputUW4_00147 (gabT1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PputUW4_00147 (gabT1)
00310 Lysine degradation
PputUW4_00147 (gabT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppuu01007
]
PputUW4_00147 (gabT1)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
PputUW4_00147 (gabT1)
2.6.1.48 5-aminovalerate transaminase
PputUW4_00147 (gabT1)
Amino acid related enzymes [BR:
ppuu01007
]
Aminotransferase (transaminase)
Class III
PputUW4_00147 (gabT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFY17355
UniProt:
K9NDR2
LinkDB
All DBs
Position
165674..166951
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AA seq
425 aa
AA seq
DB search
MSKTNASLMARRTNAVPRGVGQIHPIFAESAKNATVTDVEGREFIDFAGGIAVLNTGHVH
PKIIAAVTEQLNKLTHTCFQVLAYEPYVEVCEKINAKVPGDFAKKTLLVTTGSEAVENSI
KIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALYPNELHGVS
IDDSIASIERIFKNDAEPKDIAAIIIEPVQGEGGFYVAPKEFMKRLRALCDQHGILLIAD
EVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA
GSPIACAAALAVMEVFEEEHLLDRCKAVGERLVTGLKAIQAKYPVIGEVRALGAMIAVEL
FENGDSHKPNAAAVASVVAKARDKGLILLSCGTYGNVLRVLVPLTSPDEQLDKGLAIIEE
CFAEL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagactaacgcttctttgatggcccgccgtaccaatgcagttccacgtggtgtt
ggccagattcacccgatcttcgccgagtccgcgaagaacgcgaccgtgaccgacgttgaa
ggtcgtgagttcatcgacttcgccggcggtatcgccgtgctgaacaccggccacgtgcac
ccgaaaatcatcgcggccgtgaccgagcagctgaacaagctgacccacacgtgcttccag
gtgctggcctacgagccgtacgtagaagtgtgcgaaaaaatcaacgccaaggtgccaggc
gatttcgccaagaaaaccctgttggtgaccaccggttccgaagccgtggaaaactcgatc
aagatcgcccgtgccgccactggccgtgccggcgtgatcgcgttcaccggcgcttaccac
ggtcgcaccatgatgaccctgggcctgaccggtaaagtcgtgccttactcggccggcatg
ggcctgatgccaggcggcatcttccgcgcgctgtacccgaacgaactgcacggtgtgagc
atcgacgactcgatcgcttccatcgaacgcatcttcaagaacgacgccgagccgaaagac
atcgctgcgatcatcatcgagccggttcagggtgaaggtggtttctacgtcgctccgaaa
gaattcatgaagcgtctgcgtgccctgtgcgaccagcacggcatcctgctgatcgctgac
gaagtacagactggcgctggccgtaccggtactttcttcgccatggaacagatgggcgtt
gctgccgacctgaccaccttcgccaaatccatcgctggcggcttcccgctggccggtgtg
tgcggcaaggccgagtacatggacgccatcgctccaggcggcctgggcggcacctacgcc
ggtagcccgatcgcttgcgccgcggccctggccgtgatggaagtgttcgaagaagagcac
ctgctggatcgttgcaaggccgttggcgagcgtctggtaaccggcctgaaggccatccag
gccaaatacccggtgatcggcgaagtccgtgccctgggtgcgatgatcgctgtcgagctg
ttcgaaaacggcgacagccacaagccaaacgccgccgctgtggcatcggttgtggccaag
gctcgcgacaagggcctgatcctgctgtcctgcggcacctacggcaacgttctgcgcgtc
ctggtaccgctgacctcgccggacgagcaactggacaaaggcctggcgatcatcgaagag
tgcttcgccgagctgtaa
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