Pseudomonas sp. UW4: PputUW4_03453
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Entry
PputUW4_03453 CDS
T02357
Name
(GenBank) PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Organism
ppuu
Pseudomonas sp. UW4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AFY20646
UniProt:
K9NKL2
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Position
4014784..4018062
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AA seq
1092 aa
AA seq
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MPKSVDRIPPMPRIQAIDPKSSEQSWESASQLLAALNGARLGAWYWDIERGKISWSRGTQ
ALFGFDPRQPLPHDLEYLDLLPPEDRAKTVRAFHAVIGGAPLEQAMHHRIRWPDGSLHWL
EISGSLLPDKHGRPRMIGVIREITHQRQREQALSSSEKRFATLFHLCPNMVLLTRQEDGL
ITEANQYFESLFGWPVQNAIGRTTLELGLWVHPEQRAELVKATKAKGDVVSMEVQFRASN
GQIHDGILSAQKVELEGQPYLLSTFLDTTERKVAEHALKDSQERLDLALDSAQLGTWDWH
IPSGMLYGSARAAQLHGLEAKPFHESFDEFFEGVPGEERDTMRDAYQSLREGPAGNYQLT
YRVQLPDGSSRYLESRARLYRDDNGVPVRMAGTLLDITDQVEREQRLVASEEKFATLFQV
SPDPICVTHQDSGQFIEINSSFTQTFGWSAADVIGRSADEIGLWDASAKSLRRIEQVIRE
QGLNNVAILVQHKDGQALTCVISSRQISVGDQACIVTTLRDITQQQRSEAALKASEEKFA
KAFHSSPDAITITERDTGRYLEVNDGFCRLTGYRAEEVVGRTVYQVGIWAEEKQRSALLA
ELQIKGRVHHQEMLGRNKRGELLTVEVSVEPITLNETACLLLTARDVSLLKNAEAQIRHL
AYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALMFLDLDHFKHINDSLGHPVGDTVLK
IITARLEASVRMEDTVARLGGDEFVVLLSGLEGSRSEVSDQVRELADTIRELLSEPMFLD
GQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAKDSGRNTAQMYHNTMQKAASERLR
METDLRLALSRGEFRVHYQPQVDARGDRIVGAEALVRWNHPELGAQSPTEFIKVLEDSGL
ILEVGTWILDEACQAFKKLIDRGLVNPYKFSLCVNISPRQFRQNDFVERVENSLATYGLP
CTLLKLEITEGIVIQNLEDTIGKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDTLKID
KSFIRDATSDPNDAEIIRAIVAMARSLDLKVIAEGVETAEQLEFLQGLECHFYQGYLHSP
PLPVEEFQLLLK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatctgtagaccgtattccgccgatgccgcgtatccaggcaattgatccgaaa
agctccgaacagagctgggaaagcgcctcgcaattgctggccgcgctcaacggtgcgcgc
ctgggtgcctggtattgggacatcgaacgcgggaagatcagttggtcccggggtacgcag
gcgctgttcggcttcgatccacggcaaccgctgccccatgacctggaatacctcgacctt
ctacccccagaggatcgcgccaaaaccgttcgtgccttccatgcggtcattggcggcgcg
ccactggagcaggccatgcaccaccgcatccgctggcccgacggcagcctgcactggctg
gaaatcagcggcagcctgttgccggacaagcatggccggccgcggatgattggcgtgatc
cgcgagatcactcaccagcgccagcgtgagcaggccttgagcagctcggaaaaacgcttc
gccaccctgtttcacctgtgcccgaacatggttctgctgacccgccaggaagacggcctg
attaccgaagccaaccagtatttcgaaagcctgttcggttggccggtgcaaaacgcgatt
ggccgcaccaccctggaactggggctgtgggtgcaccccgagcaacgggccgaactggtc
aaggccactaaagccaagggcgacgtggtgagcatggaagtgcagtttcgcgccagcaac
ggccagatccatgacggcatcctcagtgcgcaaaaagtcgagctcgaaggccagccctat
ctactgagcaccttcctggacaccaccgaacgcaaagtcgccgaacatgccctcaaagac
agccaggaacgcctcgacctggccctggattcggcgcaactcggtacctgggactggcat
attcccagcggcatgctctacggatcggcacgggccgcccaactgcacggcctggaagcc
aaaccctttcacgagtccttcgacgagttcttcgaaggcgtacccggcgaagagcgcgac
accatgcgcgacgcctaccaaagcctgcgcgaaggcccggccggcaactatcaattgacc
taccgcgtgcaattgcccgacggcagctcacgctacctggaaagccgcgcccgcctctac
cgcgatgacaacggcgtgccggtgcgcatggccggcaccttgctcgacatcactgaccag
gtggagcgcgaacaacggctggtggcctccgaagaaaaattcgccacgctgttccaggtc
agccccgatccgatctgcgtcacccaccaggacagcggccagttcatagaaatcaactcc
agcttcacccagaccttcggctggagcgccgccgatgtgatcggccgcagtgccgacgaa
atcggcctgtgggacgcgtcagcgaaaagcctgcgacggatcgaacaagtgatccgcgaa
caaggcctgaacaacgtcgccattctcgtccagcacaaggacggacaggccctgacctgc
gtgatttccagccgccagatcagcgtcggcgaccaggcctgcatcgtcaccacgctgcgc
gacatcacccagcaacaacgctcggaagcggcgctcaaggccagtgaagagaaatttgcc
aaggccttccactccagccccgatgccatcaccatcaccgagcgcgacaccggccgctat
ctggaggtcaacgacggtttctgccgcctgaccggctaccgcgccgaagaagtggtgggg
cgcacggtgtaccaggtcgggatatgggcggaagaaaaacaacgctcggcgctgctggcc
gaattgcagatcaagggccgggttcatcaccaggaaatgctcgggcgcaacaagcgcggc
gaactgctcaccgtcgaagtctcggtggagccgatcaccctcaacgaaaccgcctgcctg
ctgttgaccgcgcgggacgtgagcctgctgaaaaacgccgaagcgcagattcgccacctg
gcctaccatgacccactgaccaacctgcccaaccgtgccttgctgatggaccgcctgagc
cagcagatcgccctgctcaaacggcataacctgcgcggcgcgctgatgttcctcgacctc
gaccatttcaagcacatcaacgactccctcgggcacccggtgggcgataccgtgctgaaa
atcatcaccgcgcgcctggaggccagcgtgcgcatggaggacaccgttgcacgcctgggt
ggcgacgaattcgtggtgctgctcagcggtctcgaaggctcgcgcagcgaagtcagcgat
caggttcgggaactggccgacaccatccgcgaactgctgtccgaaccgatgttcctcgac
ggccagcgcctgcaagtgacgcccagtatcggcattgcgctgatccccgatcacggctcg
accccgaccgacctgctcaagcgcgccgacatcgcgctctatcgcgccaaggactcgggg
cgcaatactgcgcagatgtaccacaacaccatgcagaaggccgcgagcgaacgcctgcgc
atggaaaccgacctgcgcctggctctgtcccggggcgagtttcgcgtgcattaccaaccc
caggtcgacgcccggggcgaccgcatcgtcggcgccgaggctctggtacgctggaatcac
ccggaactcggcgcgcagtcacccaccgagttcatcaaggtgctggaagacagcggactg
atcctggaggtcggcacctggatcctcgacgaagcctgccaggccttcaagaaactgatc
gaccgaggcttggtgaacccgtacaaattcagcctgtgcgtgaacatcagcccgcgccag
ttccgccagaacgatttcgtcgaacgcgttgaaaacagcctcgccacctatgggctgccc
tgcacgttgctgaagctggaaatcaccgaaggcatcgtgatccagaacctggaagacacc
atcggcaaaatgcgccgcctgaaaaaactcggagtgagcttcgccatggacgacttcggc
accggctattcctcgctgacctacctcaagcgcctgccggtcgacaccctgaaaatcgac
aagtcattcatccgtgacgccaccagcgacccgaacgacgccgagatcatccgcgccatc
gtcgccatggcccgcagcctggatttgaaagtgattgccgaaggggtggaaacagcggag
cagcttgagttcctgcaggggctggagtgtcacttctaccaagggtatttgcacagcccg
ccgttgccggtggaagagtttcagttgttgctcaaatag
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