Pseudomonas sp. UW4: PputUW4_04501
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Entry
PputUW4_04501 CDS
T02357
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00470
D-Amino acid metabolism
ppuu00550
Peptidoglycan biosynthesis
ppuu01100
Metabolic pathways
ppuu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PputUW4_04501 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputUW4_04501 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PputUW4_04501 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
PputUW4_04501 (ddl)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PputUW4_04501 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
Precursor biosynthesis
Amino acid ligase
PputUW4_04501 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AFY21693
UniProt:
K9NRB9
LinkDB
All DBs
Position
complement(5167872..5168855)
Genome browser
AA seq
327 aa
AA seq
DB search
MTAAYANLFSTIAPKDFGRVAVLFGGKSAEREVSLKSGNAVLDALLSAGVDAFGLDVGDD
LLQRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLCSEADCISAATELGFPLIVKPAHEGSSIGMAKVSSASELIDAWKAAST
YDSQVLVEQWIHGPEFTIATLRDQVLPPIALGTTHSFYDYDAKYIANDTQYRIPCGLDRV
KEQELMELTAKACEALGIAGWGRADVMQDAEGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVAGNAAGYQESTRG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaacctgttctccacgatcgcgccgaaagacttcggccgcgtc
gccgtgctgttcggcggcaagagtgccgagcgcgaggtgtccctgaagtcgggcaacgcg
gttctcgacgcgctgctaagcgccggtgtcgacgcgttcggcctcgacgtgggcgatgac
ctgctgcagcgtctgcagagcgaaaagatcgaccgcgccttcatcatcctccacggtcgt
ggcggtgaagacggcagcatgcagggcctgctcgaatgcctgggcattccgtacaccggc
agcggcatcctggcgtcggccctggcgatggacaaactgcgcaccaagcaggtctggcac
agcctgggcattccgacgccacgtcacgcagtcctttgcagcgaggccgattgtatttcg
gcagcgacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagtatc
ggtatggccaaagtgagttccgcgtccgaattgatcgacgcatggaaagcggccagtacc
tacgattcgcaagtgttggtcgagcaatggattcacggtccggagttcaccatcgccact
ctgcgtgaccaggtgttgcctccgattgccctgggcacgacgcacagcttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccatgtggtctggaccgcgtc
aaggaacaggaactcatggaactcacggcgaaagcctgtgaagcgctgggtatcgccggt
tggggcagggcagacgtgatgcaggacgccgaagggcagttctggttcctggaagtcaac
accgcaccgggcatgaccgatcacagcctggtgccgatggcggcccgtgccgccggtctg
gatttccagcaactggtcctggccattctggccgagagcgttgccggcaatgctgccggt
taccaagagtcgacgagaggttaa
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