Pseudomonas parafulva: NJ69_13615
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Entry
NJ69_13615 CDS
T03520
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00300
Lysine biosynthesis
ppv00550
Peptidoglycan biosynthesis
ppv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NJ69_13615
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NJ69_13615
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppv01011
]
NJ69_13615
Enzymes [BR:
ppv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NJ69_13615
Peptidoglycan biosynthesis and degradation proteins [BR:
ppv01011
]
Precursor biosynthesis
Amino acid ligase
NJ69_13615
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AIZ33957
UniProt:
A0A0A7JNF0
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All DBs
Position
complement(3158712..3160199)
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AA seq
495 aa
AA seq
DB search
MTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKLDGRVHIADALARGAAAIA
YEEQGATVLPLTDVPLIPVKGLIGQLSSIAGRFYGEPSRQLELIGVTGTNGKTSVTQLVA
QALDLLGQRCGLIGTLGTGFHGELQSGRLTTPDPIAVQSTLNDLKKAGAKAVAMEVSSHA
LEQGRVAALAFDIAVMTNLSRDHLDYHGSMQAYEAAKAKLFAWPSLRCQVVNLDDDFGRR
LAKAYAQRPAADHIETRLLSYSLENRDASLYCREACFDDDGVRAILVTAQGERTLRSQLL
GRFNLSNMLAAVATLLALEYPLDDILKVIPQLQGPVGRMQRLGGGEKPLVVVDYAHTPDA
LEQVLQALRPHARGQLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPLRI
FDDIRPGLRAADAVEFMGGRGQAIAHLIASAAAHDVIVLAGKGHEDYQEINGERLAFSDL
LEAEKALSAWEAPHA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattgagcaaactgttcgcccacgccagccgcgatccgctgatccgcgaa
ctgaccctcgacagccgtaacgtgcgccccggcgatctgttcctggcggtgcccggggcc
aagctcgacgggcgcgtccatatcgccgatgccctggcgcgtggcgcagccgccattgct
tatgaagagcagggcgccaccgtactgccgctgaccgatgttccactgattccagtgaag
ggcctgattggccagctgtcgtcgattgccgggcgcttctacggtgagccgagccgtcag
cttgagctcattggggtcactggtaccaacggcaagaccagcgtcactcaactggtggcc
caggcgctcgacttgctgggtcagcgatgcggcctgatcggcaccctgggtaccggtttt
cacggtgagctgcaaagcggccgactgaccacgccagaccccatcgccgtgcagtcgacg
ctcaacgacttgaagaaagcgggcgccaaggccgtggccatggaggtgtcctcccatgcc
ctcgaacagggccgggtggccgcgctggcgttcgacatcgccgtgatgaccaatctgtcg
cgcgatcacctggactaccacggcagcatgcaggcctatgaggcggccaaggccaagctg
ttcgcttggccgagcctgcgttgtcaggtggtcaatctggacgacgacttcggtcggcgc
ctggccaaggcctacgcccagcgacctgctgccgatcatatcgagacccgattgctcagc
tatagcctggaaaaccgggacgcctcgttgtactgccgcgaagcctgcttcgacgacgat
ggcgtgcgcgcgatcctggtcactgcccaaggcgagcgtaccctgcgcagtcaactgctg
ggccgcttcaacctgagcaacatgctggcggcagtggccacgctgctggcgctggagtac
ccgctggacgacatcctcaaggtgatcccgcaattgcagggcccggtgggtcgcatgcag
cgcctgggcggcggcgagaagccgctggtggtggtcgattacgcccacacccccgacgcg
cttgagcaggtgctgcaagccctgcgtccgcacgcccggggccagctgctgtgcctgttc
ggctgtggcggcgatcgtgaccgcggcaagcgtccactgatggccgaagtggccgagcgc
ctggccgatcgcgtgctggtcaccgacgacaatccacgcactgaagatccgctgaggatc
ttcgatgatatccgccccggtctgcgcgccgccgacgccgtcgagttcatgggcggtcgt
ggccaggccattgcccatttgatcgccagcgccgctgcgcacgacgtgatcgtgctggcg
ggcaaggggcacgaggactaccaagagatcaatggcgagcgcctggcgttctccgatttg
ctcgaagccgagaaggccctttcagcctgggaggctccacatgcttaa
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