Pseudomonas parafulva: NJ69_20000
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Entry
NJ69_20000 CDS
T03520
Symbol
rsmD
Name
(GenBank) 16S rRNA methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppv03009
]
NJ69_20000 (rsmD)
Enzymes [BR:
ppv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NJ69_20000 (rsmD)
Ribosome biogenesis [BR:
ppv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NJ69_20000 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
PrmA
Methyltr_RsmB-F
TRM
Met_10
N6_Mtase
Methyltransf_24
Methyltransf_11
N6-adenineMlase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AIZ35121
UniProt:
A0A0A7JRZ2
LinkDB
All DBs
Position
complement(4572884..4573501)
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AA seq
205 aa
AA seq
DB search
MARPSSPAQPHSKGAGQLRIIAGEWRSRRLAVPEGEGLRPTPDRVRETLFNWLAPYIEGA
HVLDAFTGSGALVLEALSRGAADAVALDSNPAAIANLKHNLELLRCPRGQILQTDALRYL
GGQAKQPFDLVFLDPPFHKDLLAEVCNLLENQQWLRDQAWVYTESETAPSSLPMPGNWRL
HREKKTGQVHYALWQRGEVRQDSQT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccagaccttcctcccccgcccagccccacagcaaaggggctggccagttgcgcatc
atcgcgggcgaatggcgcagccgtcgcctggccgtgcccgaaggcgaaggcctgcgtccg
acgcctgatcgcgtgcgcgaaaccctgttcaactggctggcgccctacatcgaaggcgcc
catgtgctggatgccttcaccggcagcggcgcgctggtgctcgaggcgctgtcgcgcggc
gcggccgatgcggtggcgctggacagcaatccggcagccatcgccaacctcaagcacaac
ctggagttgctgcgctgcccgcgcgggcagatcctgcaaaccgacgccttgcgctacctc
ggcgggcaggccaagcaacccttcgacctggtgttcctcgacccgccctttcacaaagac
ctgctggccgaggtgtgcaatctgctggaaaaccagcagtggctgcgcgaccaggcgtgg
gtctacaccgagagcgagaccgcgccgtcgagcctgccgatgccgggcaactggcgcttg
caccgggaaaagaaaaccggccaggtgcattacgccttgtggcagcgcggcgaagtgcgc
caggacagccagacatag
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