Pseudomonas putida DOT-T1E: T1E_0474
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Entry
T1E_0474 CDS
T02181
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppx03000
]
T1E_0474 (csiR)
Transcription factors [BR:
ppx03000
]
Prokaryotic type
Helix-turn-helix
GntR family
T1E_0474 (csiR)
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GFIT
Motif
Pfam:
FCD
GntR
Motif
Other DBs
NCBI-ProteinID:
AFO46333
UniProt:
I7B4U4
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All DBs
Position
539544..540239
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AA seq
231 aa
AA seq
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MEALAPRQNSAFSGYERLKKDIIRGVFKPGEKLLMSALKERYDLGVGPLREALSQLVAEH
LVNAISQKGYRVAPMSLDEMNDIYDARANLEAMIIALAIERGDDAWEASVLAHSHTLAKV
VEVKTREQRLDVWDERHKAFHTAIASGCGSKHLLQARTYLFDQAERYRHLWLTQTVFSEQ
ALALKRQEHAALVEVILARDAKTASAMMRSHLMTPVPIIAQIMHAEGIGAR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcgctcgccccccgacaaaactcagcattcagcgggtatgagaggctcaagaag
gacatcatccgcggggtgttcaagcccggtgaaaagctattgatgagcgccctcaaggaa
cgctacgacctcggtgtgggcccgctgcgcgaagcactgtcacaactggtggccgagcac
ctggtcaacgcgatcagtcagaaaggctaccgggtagcgcccatgtcgctggatgagatg
aacgacatctacgacgcccgcgccaacctggaagcgatgatcattgccctggccatcgag
cgcggtgacgatgcctgggaggcgtcggtgctggcccactcgcatactttggccaaggtg
gtggaagtgaaaacccgcgagcagcggctggatgtgtgggacgagcggcacaaggcgttc
catactgccattgcctcgggctgcggctccaagcacctgctgcaggcacgcacctacctg
ttcgatcaggccgagcgctaccgccacctgtggctgacgcagacggtgttttccgaacag
gcgctggcgctcaagcgccaggagcatgcggcactggtcgaggtgatcctcgcccgggat
gccaaaactgccagcgccatgatgcgctcgcacctgatgacaccggtaccgatcattgcg
cagatcatgcatgccgaaggcatcggtgcccgctag
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