Pseudomonas putida DOT-T1E: T1E_3093
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Entry
T1E_3093 CDS
T02181
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00061
Fatty acid biosynthesis
ppx00071
Fatty acid degradation
ppx01100
Metabolic pathways
ppx01212
Fatty acid metabolism
ppx02024
Quorum sensing
Module
ppx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
T1E_3093 (fadD)
00071 Fatty acid degradation
T1E_3093 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T1E_3093 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppx01004
]
T1E_3093 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppx04147
]
T1E_3093 (fadD)
Enzymes [BR:
ppx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
T1E_3093 (fadD)
Lipid biosynthesis proteins [BR:
ppx01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
T1E_3093 (fadD)
Exosome [BR:
ppx04147
]
Exosomal proteins
Exosomal proteins of breast milk
T1E_3093 (fadD)
Exosomal proteins of breast cancer cells
T1E_3093 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
AFO48930
UniProt:
I7B1N4
LinkDB
All DBs
Position
complement(3395899..3397596)
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AA seq
565 aa
AA seq
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MIENFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGANLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatttttggaaggataagtacccagccgggattacggcggaaatcaatcct
gacgaattccccaatatccaggcggtactcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagactatcacttatggcgagttgtatgcgttgtcgggg
gcgtttgccgcctggctgcagcagcataccgacctcaagccgggtgaccgcattgccgtg
caactgcccaatgtcctgcaatacccggtcgcggtcttcggtgccatgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgac
tcgggtgccaaggccctggtgtgcctggccaacatggcccacctggccgaaaaagtggtg
cccaaaacccaggtcaggcacgttatcgtcaccgaagtggccgacctgctgccgccactc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaagatggtgccggcctacaac
ctgccgcaggccgtgcgtttcaatgacgccctggcgctgggcaagggccagccagtgacc
gaggccaacccgcaggccaacgacgtggcggtgctgcaatacaccggcggtaccaccggc
gtggccaaaggcgccatgctgacccatcgcaacctggtggccaacatgctgcagtgccgg
gcactgatgggcgccaacctgcacgaaggctgcgaaatcctcatcactccgctgccgctt
taccacatctatgcgtttaccttccattgcatggcgatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgagacttgccggcgatggtcaaggaactgggcaagtggaag
ttcagcggctttgtgggccttaacaccctgttcgtcgccttgtgcaataacgaggcgttc
cgagccctggatttctcggcgctgaaaatcaccctgtcgggcggcatggccttgcagcta
agcgtggccgagcgctggaaggccgttaccggttgcgccatctgcgaaggctacggcatg
accgaaaccagcccggtggcggcggtgaacccgtcggaagcgaaccaggtgggcaccatc
ggtattccggtgccgtcgaccttgtgcaaggtcatcgacgacgccggcaatgagctgccg
cttggcgaagtgggcgagctgtgtgtcaagggcccgcaggtgatgaagggctactggcag
cgtgaagatgccacggccgagattctcgacagcgaaggctggctgaagaccggtgacatc
gccgtgatccaggcggacggctacatgcgcatcgtcgaccgcaagaaagacatgatcctg
gtctcgggcttcaacgtgtaccccaacgagctggaagacgtgttggcggccttgccgggc
gtgctgcagtgcgctgccatcggtgtgccggacgagaagtcgggtgaagtgatcaaggtc
ttcatcgtggtcaagccgggcatgaccgtgaccaaggagcaggtgatggagcacatgcgt
gccaacgtcaccggttacaaggtaccgcgccacatcgagttccgcgattcgctgcctacc
accaacgtgggcaagatcctgcgccgcgaactgcgtgatgaagagctcaagaagcaaggc
ttgaagaagatcgcctga
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