Pseudomonas putida DOT-T1E: T1E_4358
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Entry
T1E_4358 CDS
T02181
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00470
D-Amino acid metabolism
ppx00550
Peptidoglycan biosynthesis
ppx01100
Metabolic pathways
ppx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T1E_4358 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T1E_4358 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
T1E_4358 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
T1E_4358 (ddl)
Enzymes [BR:
ppx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
T1E_4358 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
Precursor biosynthesis
Amino acid ligase
T1E_4358 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
TTL
ATPgrasp_YheCD
ATP-grasp_5
GARS_A
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AFO50187
UniProt:
I7C1A7
LinkDB
All DBs
Position
4739539..4740495
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AA seq
318 aa
AA seq
DB search
MTSAYDKLQSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVGIDVGDD
LLARLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAK
YDSQVLVEQWIHGPEFTIAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSV
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGQFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVATRG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgcctacgacaagctgcagtcgaccctggacgtcaaggcgttcggccgcgtc
gccgtgctgtacggtggcaagagcgccgagcgtgaggtgtcgctgaaatctggcgccgca
gtgatcgatgcgctgagcactgccggcgtcgacgtggttggcatcgacgtcggtgacgac
ctgctcgcacgcctgcagagcgagaagattgaccgcgccttcatcatcctccacggccgt
ggcggtgaagacgggagcatgcaaggtttgctggagtgcctgggcatcccctacaccggc
agcggcatcctggcttctgcgctggcgatggacaagctgcgcaccaagcaggtgtggcag
agcctgggcattcccacgccacgccacgcggtgctggcgagcgaaagcgattgtttgcag
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggctctagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggacgccgccaaa
tacgattcccaggtactggtggagcagtggatccacggtccggagttcaccatcgcggta
ctgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcatcccgtgcgggctggatagcgtc
aaggaacaggaactgatcgacctgaccgcgcgcgcctgcgatgccattggcatcgaaggc
tgggggcggttggacgtgatgcaggacgagcagggccagttctggctgctcgaagtcaac
accgcaccaggcatgacagatcatagcctggtgcccatggcggcccgcgcggctggcctg
gacttccagcaactggtgctggcaatcctggccgaaagcgtggcgacgcgaggttaa
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