Pseudomonas poae: H045_09650
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Entry
H045_09650 CDS
T02456
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppz
Pseudomonas poae
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppz03400
]
H045_09650
DNA repair and recombination proteins [BR:
ppz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H045_09650
Archaeal homologous recombinant proteins
H045_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
DUF6884
ABC_tran
nSTAND3
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGE25997
LinkDB
All DBs
Position
2195370..2199008
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVNGRRYRARWEANRARDKAS
GKLQNSRQSLLDLDSDQVLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDARDVHKQLQDQATGIVPLAAEARAELDQQLS
DAQQQLKTQQAQLKQLELQHTWLKELREWQERQLSATQQLQQAHAEWTAQSPQRQDLNHL
EQLAPQRHHFARQAELNTLLTPLAAQIQQLIEQQHALHTRQQQAQLQQTSAQSALAHALK
NQADAAPLLRQAVEEQSTLAHLTRELAKRTEEKHQQQSACHEGQARLKAMQDKHADVEQR
LQRLAAELERSAVLAPLSDAWNAYRDRLQQLMLIGNRLSKGQAELPQLEQRATATAQTFA
EQREALDLLFQEAGAEPHAVAEQVQLLASLLQDNRKQQRAFEDLTRLWDSQQQLDQQAAA
LTQKLVDAAQKREQLNQTGLQAKAELAVAEQTLTVTRQLLERQRLARSASVEELREQLQD
DQPCPVCGSPEHPYHQPEALLHSLGRHDETEEATAQKAVDTLKEKLTELRGEVGGLIAQQ
KEFLQQQDHLSAQHTALKPSLEAHPLAASLFNQEAAKRSAWLAQQLNQLTQSIGQDEQRQ
AALLNLQHNAGRLQQQLQSAQEASQQARQLMLDQQRELANDRERLDEELHAFASLLPAET
LDGLRRDPAATFMLLDQHVSQRLEQLGHQRDELAEQQARQQAIEKEHTHQQHREQQLDAL
SQQFNELATQQQAAQEKLATLLGDYASAEHWQQQLEQAVVQSRQSETDASQQLQAIHNEL
IQLAADLKAREERQSALHSEQAALDTRLSEWRALHAELDDTQLTRLLGFDDAQLSALRHQ
VQASEKAVEQARVLLQEREQRLADHQALHNGNLEAEQLDSNLAALNQQLAEGEKCCAELR
ARQSEDQRRQDANSALAAQITKAYEEWQRWARLNALIGSATGDVFRKLAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVT
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttgccatccgcctgaaaaacctcgcctcactggcaggcccgtttgaaatc
gactttaccgccgagccgctagccagcgccggcttgtttgcaatcacaggccccaccggc
gcgggtaaaagcaccctgctcgatgccttgtgcctggcgttgtttggcgcggtgccgcgg
ctgggcgacaccggccaggcgaaaatgccggatgccgatactgacatttccattggcgat
ccgcgcacgctgatccgtcgcggcacggggggcggctatgccgaagtggattttgtcggc
gtcaacggccgtcgctaccgcgcgcgctgggaggccaaccgcgcccgcgacaaggccagt
ggcaagctgcagaacagtcggcaaagcctgctggacctggacagcgatcaagtgctggcc
agccagaaaaccgaatacaaaactcagctggaactggccctgggcctgaacttcgagcag
ttcacccgtgcggtgctgctggcacaaagcgagttcagcgcgttcctcaaggccaacgac
aacgagcgcagcgagctgctcgaaaagctcaccgacaccgcgctgtacacccagcttggt
cgccgcgccttcgacaaggccaaagacgcgcgagacgtacacaagcagttgcaggatcaa
gccaccggcatcgtcccgctggccgccgaagcccgtgccgaactggaccagcaactgagc
gacgcacagcaacagttaaagactcagcaggcccagctcaagcagctcgaattgcaacac
acctggctcaaggaactgcgcgaatggcaggagcgccagctcagcgccacccaacaactg
caacaggcacacgccgagtggacagcccagagcccgcaacgccaggacctgaaccacctg
gagcagttggcgccacaacgtcatcacttcgcgcgccaggccgaactcaataccttgctc
acgccactggccgcgcagattcagcagcttattgaacagcaacacgcgctgcatacccgt
cagcagcaggcacagttgcaacaaaccagcgcgcaaagcgctttggcccatgccctgaaa
aaccaggccgacgccgcgccgctgttgcgccaggccgtcgaagagcaaagcaccctcgcc
cacctgactcgcgaactcgccaagcgcaccgaagaaaaacaccagcaacaaagcgcctgc
catgaaggccaggcccggctcaaagccatgcaggacaaacacgccgacgtcgaacagcgc
cttcaacgcctggccgccgagcttgaacgcagcgccgtccttgccccactgagcgatgcc
tggaacgcctaccgcgatcgcctgcaacagctgatgctgatcggcaaccgcctgagcaaa
ggccaggccgaattgccccagctggaacagcgcgccactgccactgcacaaacgttcgcc
gaacagcgcgaagcgctggacctgctgtttcaggaagccggcgccgaaccccacgctgta
gccgaacaggtgcagctgctggccagcctgctgcaagacaatcgcaagcaacagcgcgcc
ttcgaagacctgacgcgcctgtgggacagccagcagcagttggaccagcaagccgccgca
ctcacgcagaagctcgtcgacgcggcgcaaaaacgcgagcaactgaaccagaccggcctg
caagccaaggccgaactggcggtcgccgaacagaccctcaccgtgacccggcaactgctg
gagcgccaacgcctggcgcgcagtgccagcgtcgaggagttgcgcgaacagttacaggat
gaccagccctgccccgtgtgcggcagccctgaacacccgtatcaccagcccgaagcgctg
ctgcacagcctgggtcgccacgatgaaaccgaagaggccacggcgcagaaagccgtcgac
acgctcaaggaaaagctcaccgagctgcgcggtgaggtcggcggcctgatcgcccagcag
aaagagttcctgcaacaacaggaccacctgagcgcccagcacactgcgctcaagccgagc
cttgaggcgcacccgctggcggcttcgctgttcaatcaggaagcggccaaacgcagtgcc
tggctggcccagcagctcaaccagttgacccagagcatcggccaggacgaacagcgccag
gccgcactgcttaacctgcaacacaatgccgggcgcctgcaacagcagctgcaaagcgcc
caggaagcgagccagcaagcgcgccaactgatgctcgaccagcaacgcgagctggccaac
gaccgcgaacgcctggacgaagaattgcacgccttcgccagcctgttgcccgccgaaacc
ctcgacggtctgcgccgcgatccggcggcaaccttcatgttgctcgaccagcacgtcagc
cagcggcttgagcaactgggccatcaacgtgacgaactggccgaacagcaggcgcgtcag
caggccatcgagaaagagcacacccatcagcagcatcgtgagcagcagctcgacgcgctc
agccagcagttcaatgagctggcgacccagcaacaggcggcccaggaaaaacttgcgacc
ttgctgggcgactacgccagtgccgaacactggcaacagcagctggaacaggcggtggtg
cagtcacgccagagcgaaaccgatgccagtcaacaattgcaggccattcataacgagctg
atccagttggcggctgacctcaaggcccgtgaagaacgtcagtcggcgctgcacagcgaa
caagcggcgctcgacacacgcttgagcgagtggcgcgcattgcatgccgagttggatgac
acccaactcacacgcctgctggggttcgacgacgctcagctcagtgcgctgcgccaccag
gtgcaggccagtgaaaaagccgtcgagcaagccagggtgttgctgcaagagcgcgaacag
cgcctggccgaccatcaggctctgcacaacggcaacttggaagccgaacagctggacagc
aacctcgcagccctgaaccagcaattggcggagggcgaaaaatgctgcgccgagctgcgc
gcgcgccagtctgaagaccagcgccgccaggacgccaacagtgcactggccgcgcaaatc
accaaggcctatgaagaatggcaacgctgggcgcgcctgaatgcactgatcggctcggcc
accggcgacgtgttccgcaaactcgctcaggcctacaacctcgacctgttggtgcaccac
gccaacgtgcagctgcgccaactggtgcgtcgttatcgcctcaagcgcggcggcagcatg
ctcgggctgctggtgatggacacggagatgggtgacgaactgcgctcggtgcattcgttg
tctggcggcgagacgtttctggtgtcgttggccctggcccttgggctggcatccatggcg
tcgagcacgctgaagatcgagtcgctgtttatcgacgagggcttcggcagcctggacccg
gagtcgctgcaactggcgatggacgcgctggacggcttgcaggcccagggccgcaaggtg
gcggtgatttcccatgtgcaggaaatgcacgagcgcattccggtgcagatccaggtcaag
cgtcagggcaacggcttgagcaccctggaggtcacgtga
DBGET
integrated database retrieval system
