Cutibacterium avidum: PALO_05795
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Entry
PALO_05795 CDS
T02632
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pra
Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_05795
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_05795
Enzymes [BR:
pra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PALO_05795
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Topoisomerases
PALO_05795
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PALO_05795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AGJ77769
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Position
1275046..1277697
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AA seq
883 aa
AA seq
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MAKKTVDDDFTENIIDVNVSREMENSFLEYAYSVIYSRALPDARDGLKPVQRRILFTMSD
MGVRPDRAHVKSARVVGQVMGQLHPHGDAAIYDALVRTAQPWAMRLPLVDGHGNFGSLDA
GPAAMRYTECRMAPPALAMIDGFDEDTVDFEPNYDGKETEPSVLPAAFPNLLVNGASGIA
VGMATNIPPHNLVEVVAALRHMLNHPDTDLEEIMRFVPGPDLPTGGRIVGLDGIADAYRT
GKGSFKIRATARIEKVSPRRRGIVVTELPYMVGPERIIDQIKTLVQSKKITGISDVKDLT
DLANGTRLVIEVKNGINPEALLERLYKLTKLEDSFAINAVSLVEGQPRTLGLKEMLQVYL
DHRLEVTLRRTNFQLNKAKNRLHLVEGLLLAIVDIDDVIAIIRSSEDAATARTRLMEAFN
LDEVQANYILDMQLRRLTKFSTIELESERDELRERIEGLVLIVNDESELRRVVSEDLAEV
STKYGTPRRTVLLGAAPAVAAASAPLEVPDDPCWVLLSATGLLARIDTEDDLPSGGDRAS
HDVIISRARTTARGDFGIITSTGRLIRAHAIELASLPMTATAPSVAGGTPLADLVGLEKD
EKALAVTSLSGEGPSLALGTRNGIVKRVNPELLGKDFWEVISLKDGDEVVGAVELDDENL
ELCFVTEGASLLHFPATAVRPQGRSGGGVTGIKAKDPVVFFGAAPSHGSSVVTIAASSPA
AAGKEPGSVKVTPFDQFPPKGRATGGMRCQRFLKGETALVLAWIGPDPAVACAASGVPVE
LPEPSLRRDGSGDQGRQPILAVGTRNHGGDDVANPAERLDPDTSDDDLQPTDVRSGATPD
AGGALIPAPESTLAKDSEESKPHRRRRRTRTEHDDKSEPDLFS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagacggtggatgacgacttcaccgagaacatcatcgacgtcaatgtctcc
cgcgagatggagaacagcttcctcgagtacgcctactccgtcatctactctcgtgccctg
cccgacgcccgtgacggcctcaaacctgttcagcgtcgcatcctcttcaccatgagtgac
atgggggtccgccctgatcgcgcccatgtgaaatcggcccgtgtcgtcggtcaggtcatg
ggtcagctccacccacacggcgacgccgccatctacgacgccctcgtccgcaccgcccag
ccctgggccatgcgcctccctctggtcgacgggcacggcaacttcggatccctggatgcc
ggcccggccgccatgcgttacaccgagtgccggatggctcccccagccctggccatgatt
gacgggttcgacgaggacaccgtcgacttcgagcccaactacgacggcaaggagaccgag
ccgtcggttctgccggccgccttcccgaacctgctcgtcaacggggcgtcgggcatcgcg
gtgggtatggccaccaacattccgccacacaacctcgtcgaggtcgtcgccgccctgcgt
cacatgctcaatcacccggacaccgatctcgaggagatcatgcgcttcgtgccgggaccg
gatctgcccaccggcgggcggatcgtcggccttgacggcatcgctgacgcctaccggacc
ggcaagggctccttcaagatccgcgccaccgcccgcatcgagaaggtctccccgcgacgc
cgcggcatcgtcgtcaccgagctgccgtacatggtcggcccggagcgcatcatcgaccag
atcaagaccttggtgcagtccaagaagatcaccggcatctccgatgtcaaggacctcacc
gacctggccaacggcacccgtctggtgatcgaggtcaagaacggcatcaacccggaggcc
ctgctggagcggttgtacaagctcaccaagctcgaggactccttcgcgatcaacgccgtc
agcctggtcgagggacagccgagaaccctcggtctgaaggagatgttgcaggtctacctc
gaccatcgcctcgaggtcacgctgcggcgcaccaacttccagctcaacaaggccaagaac
cggctgcacctcgtcgagggactgttgctggccatcgtcgacatcgacgacgtcattgcc
atcatccggtcctccgaggacgcggcaacggcccgcacccgactcatggaggccttcaac
ctcgacgaggtgcaggccaactacatcctcgacatgcagcttcgtcgactcaccaagttc
tccacgatcgagttggagtccgagcgtgacgagctgcgcgagcgcatcgaggggcttgtt
ctcatcgtcaatgacgaatccgaactgcgtcgagtcgtctcggaggacctggccgaggtg
tccaccaagtacggcacgcctcgtcgcaccgtgctgctgggagcggctcccgccgtcgct
gcagcctccgccccgctggaggtccccgacgatccctgctgggtgctgctgtcggccact
ggtctgctggcccgtatcgacaccgaggatgacctgcccagtggcggggacagagccagc
cacgacgtcatcatctcccgtgcccgcaccacggcccgtggtgatttcggcatcatcacc
agtacgggtcgtctcatcagggcacatgccatcgagctggccagtctgcccatgactgcc
accgcaccgtcggtggccggtggcaccccactggcggacctcgtggggctggagaaggac
gagaaggccctggcggtgacgagtttgtccggggaaggcccctccctggccctgggaact
cgaaacggcatcgtcaaacgcgtcaatccggaactgctcggcaaggatttctgggaggtc
atcagcctcaaggacggcgatgaggtcgtcggagccgtcgagctggacgacgagaacctc
gagctgtgcttcgtcaccgagggagcctccctgcttcacttccctgccacggcggtgcgc
ccgcaaggacgttccggtggtggtgtgaccggtatcaaggccaaggacccagtcgtcttc
ttcggcgcggctcccagccatggttcgtcggtcgtgacgattgcggcctcctcccccgct
gccgccggcaaggagcccggttcggtcaaggtgacccccttcgaccagtttccacccaag
ggccgtgcgaccggcggcatgaggtgtcagcgcttcctcaagggtgagacggccctagtg
ctcgcctggatcggccctgaccctgccgtggcatgtgcggcatccggtgttcctgtcgag
ctgccggagccgagcctgcgtcgtgacggctccggggatcagggacgccagcccatcctg
gccgtcggcacccgtaatcatggcggtgacgacgtggccaatcccgccgaacggctcgat
ccggacacctcggacgacgatctccaacccaccgatgtcaggagcggggcgactcccgac
gcgggcggagctctcatccccgccccggagtcgaccctcgcgaaggactcggaggagtcc
aagccgcaccgccgtcgtcgccgtaccaggactgagcacgacgacaaatcagaaccggac
ctcttcagctga
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