Podarcis raffonei (Aeolian wall lizard): 128403000
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Entry
128403000 CDS
T09310
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128403000 (HNF1B)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128403000 (HNF1B)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
APP1_cat
Cwf_Cwc_15
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128403000
NCBI-ProteinID:
XP_053223519
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Position
15:complement(7141119..7201078)
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AA seq
586 aa
AA seq
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MVSKLSALQQELLEALLTSGVTKEVLIQALEELMPTSGTASGNSNAASNGAYGVKLENLQ
LSPSSGGGGGGPDVDSKPVFHTLTNGHGKDKLSGDEGSDDGDDFDTPQILRELQALNTEE
AAEQRAEVERMISEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKT
QKRAALYTWYVRKQREILRQFNQTVQGSGNMTDKSSQDQLLFLFPEFNQQSQGVGQLDDP
CAETPSKKMRRNRFKWGPASQQILYQAYDRQKNPNKEEREALVEECNRAECHQRGVSPSK
AHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSTGQPHSMNLLLSHNSPHHAQPSS
SPPSKMSGVRYSQPGSNEVTSSSAISHHGNSSMVTTSQAALQQVSPAGLDPGHSHSLLPP
DGKMITAPGGGLPPVSTLTNIHSFSHHNPQQSQNLIMAPLSGVMAITQSLNSSQAQSIPV
INSVASSLAALQPVQFSQQLHSPHQQPIMQQSPNPMAQQPFMVTQLQNSHMYAHKQEPPQ
YSHTSRFPSAMVVTDTSSISSLTNMSSSKQVNNDQPSLLCGNWYAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaaattgagcgctctgcagcaagaacttctcgaagcgctcctcacctcgggg
gtgaccaaagaggtcctgatccaagctctggaggagctgatgcccacctccggcaccgcc
agcgggaatagcaacgccgccagcaacggcgcctacggggtcaaactggaaaacttgcag
ctctcgcccagcagcggcggaggcggcggcggccccgacgtggacagcaagccggttttc
cacacgctgaccaacgggcacggcaaggacaagctgtccggggacgaaggctccgacgac
ggggatgacttcgacaccccgcagatcctccgcgagctgcaggcgctcaacaccgaggag
gcggccgagcaaagggccgaagtggagaggatgatcagcgaggacccttggcgagcggcg
aagatgatcaagggttacatgcagcaacacaacatcccccagagggaggtggtggatgtc
actggactgaatcagtcccatctctcgcaacatctcaacaaggggacgcccatgaaaacg
cagaagcgggcggctctctatacgtggtacgtccggaagcagagggagattctccggcaa
ttcaaccagacagtccagggttcgggaaatatgacagacaaaagcagtcaagatcagctg
ctgtttctctttccagagttcaaccagcaaagccagggggtgggtcagctggacgacccc
tgcgctgaaacgcccagcaagaagatgaggcggaaccggttcaagtggggccccgcttcg
cagcagatcttgtaccaggcctatgaccggcaaaagaaccccaacaaggaggaaagggag
gccctggttgaggagtgcaacagggcagaatgccaccagcggggcgtgtccccctctaaa
gcacatggactgggttcgaatttggtgacagaagtccgggtctacaactggtttgcgaac
cggaggaaagaggaggcttttcgtcagaagctggctatggatgcttacagcacgggccaa
cctcacagcatgaaccttttgctctcccacaattccccccatcatgcgcaacccagctct
tccccaccaagcaaaatgtcaggagtccgctacagccaaccagggagcaatgaagtcact
tcctcctccgccattagtcaccatggcaacagctccatggtgaccaccagccaggctgcc
ctacagcaagtgtctccagccggtttggacccaggccacagccacagcctgctcccaccg
gacggcaaaatgattacggcgccaggaggtgggcttcccccggtcagtactctcacgaac
atccacagcttttcccatcataatccacaacagtcccagaacctcatcatggcaccatta
tcaggtgtcatggctatcacacaaagcctaaacagttcccaagcacagagcatccccgtc
atcaacagcgtggccagcagcctggcagccctgcagcccgtccagttctcccagcagctg
cacagcccccaccagcagcccatcatgcagcaatcgcccaaccctatggcacagcagccc
ttcatggtgacgcagctgcagaattcacacatgtacgcgcacaagcaggaaccccctcag
tattcccacacatcccggttcccttcagccatggtggtcacggataccagcagcatcagt
tcgttaaccaatatgtcttccagtaaacaggtaaataatgatcagccaagtcttctttgt
ggaaactggtacgccaaataa
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