Podarcis raffonei (Aeolian wall lizard): 128404904
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Entry
128404904 CDS
T09310
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04020
Calcium signaling pathway
praf04260
Cardiac muscle contraction
praf04261
Adrenergic signaling in cardiomyocytes
praf04270
Vascular smooth muscle contraction
praf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128404904 (CACNA1F)
04020 Calcium signaling pathway
128404904 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128404904 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
128404904 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
128404904 (CACNA1F)
04270 Vascular smooth muscle contraction
128404904 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128404904 (CACNA1F)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128404904 (CACNA1F)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
HemY_N
Motif
Other DBs
NCBI-GeneID:
128404904
NCBI-ProteinID:
XP_053226940
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All DBs
Position
17:complement(39357826..39416251)
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AA seq
1962 aa
AA seq
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MTIFANCVALGVYIPFPEDDSNVSNHNLEQVEYVFLIIFTVETFLKILAYGLVMHPSAYI
RNGWNLLDFVIVVVGLFSVILEQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSG
VPSLHIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIVGSDLEAEED
PSPCAFSGHGRECLANNSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWM
QDAMGHELPWLYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEE
DLKGYLDWITQAEDIEPDEEGDEADEKHTRVTVADLTEKKKKKWFRYSSHSTDTHTSLPA
SETTSVNTENVGEEEHHQNNCCDVCLGKLSKTKFGRRVRRINRLFRKKCRLAVKSVSFYW
MVLLLVFLNTLTIASEHYNQPDWLTQIQAYANKVLLSLFTMEMLLKMYSLGLQAYFVSFF
NRFDCFVVCGGILETVLVEFEIMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSM
KSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDW
NAVMYDGIMAYGGPYFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLADGDNINTAKEG
EHKEKEAPAEGEQSNEKEEEKNVKVECGEEEEEEVEEGSEEAGEEEEEEEAEGDQQSLAE
SHLDKLEETPTEKVLPIPDGSSFFCLSKTNPLRVGCHKLIHHHIFTNLILVFIILSSISL
AAEDPIRAHSFRNNILGYFDYAFTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVV
SVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTT
LLQFMFACIGVQLFKGKFYSCTDEAKHTPYECKGTFIVYKDGDVAHPMVRERAWLNSDFN
FDNVLSGMMALFTVSTFEGWPALLYKAIDANAENEGPIYNYRVEISIFFIVYIIIIAFFM
MNIFVGFVIITFRAQGEQEYKNCELDKNQRQCVEYALKAQPLRRYIPKNKYQYKFWYMVN
STGFEYIMFVLIMLNTIALAVQHYEQSQPFNYVMDLLNMVFTGLFTVEMVLKIIAFKPKH
YFCDAWNTFDALIVVGSVVDIAVTEVNSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRT
LLWTFIKSFQALPYVALLIAMIFFIYAVIGMQTFGKVAMQDSTPINRNNNFQTFPQAVLL
LFRCATGEAWQEIMLASLPGKRCDPESDYEPGEEFTCGSNFAIVYFISFFMLCAFLIINL
FVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPAAKGRIKHLDVVTLLRRIQPPLGF
GKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGDLDVANKELRAVIK
KIWKRTKPKILDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRKRKEKGMLGPDGSPSNST
ALQAGLKSLQDLGPEIRRAMSCDLEEEEEAEETVCEEETVTYKSSEALYGSAPDHHITAA
SPDGENKTLMNGLVGSRHPSSVSLSHMTNGPTHYEENVGGNDEPAELPNIPTRRRMSRRS
SDSSGIPPTVHEEATHTEDYREDTSVEQGYYSREEDSESLASRDRQPCLHTPQPHRRRWD
NSYGGSLPLPSRRINNGMVNGMLDGRQPKRRRLLPPTPTGRKPAFSIQCLQRQGSCDDIP
IPGTYHQNAPPCRARAQGYGSYDSWHSGSHSSTASSQSWATPPKRGRLLYAPLILVEEDG
LPGHSWEKNSNSLPPMSRARWYMNEPELPYRSYGQLRVPGPLKHSYSDKPGSADSLVEAV
LISEGLGLYARDPKFVAFTKREIADACHMTIDEMESAATDLLSRKVPGSESSGRGGGGHA
LYSSDGEHSGAGSLGPVYSDEEPFRSHEEEDLGDEMACVTSY
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttcgccaactgtgtggccttaggagtctatatccctttccctgaggatgac
tcgaatgtctccaaccacaacttggagcaagtggagtatgtttttctcatcatattcacg
gtggagactttcctcaagatccttgcctatggactggtcatgcatcccagcgcctacatc
cgcaatggctggaaccttctcgattttgtcatcgttgtggtgggtctcttcagtgtcatc
ctggaacaagtttcccacaagcctggagaggctcatcacatgagtgggaagccgggtggg
tttgatgtcaaagctctgagagccttccgtgtcctgagacctctgcgcctcgtctctggt
gtccctagcctgcacattgtcttgaactctatcatgaaagccatggtgcccctcctgcac
attgcgctgcttgtccttttcgtcatcatcatctatgctatcattggcttggagctcttt
atcggccgcatgcacaagacctgcttcatcgttggttcagacctggaggctgaggaggac
ccatcgccttgcgccttctctgggcacggccgggagtgcttggcgaacaacagcgagtgc
cgtgggaagtgggaaggacccaatggtggcatcaccaacttcgacaacttcttttttgcc
atgctgactgtcttccagtgcatcaccatggaaggttggaccgatgtgctctactggatg
caggatgcaatgggtcacgagctgccctggctctactttgtcagccttgtcatctttggc
tccttcttcgtgctcaatctggttttgggtgtgctgagtggagaattttccaaggagcga
gagaaggcaaaggcccggggtgacttccaaaagttacgggagaagcagcagatggaggaa
gacctgaagggctatttggattggatcacgcaggccgaagacattgagcctgacgaggaa
ggggacgaggcagacgagaagcacacgcgcgtgactgtggcagacctgacggagaagaag
aagaagaaatggttcagatacagcagtcactccaccgacacccacaccagtctccctgcc
agtgaaaccacctcagtgaatacggagaatgttggggaggaagaacatcaccagaacaat
tgctgcgatgtgtgtttaggcaagctctccaagaccaaatttggccgccgagtgcgacgc
atcaaccgtctcttccggaagaaatgtcgcctggctgtcaaatctgtctctttctactgg
atggtcctgctccttgtctttctcaacactctcacaattgcctctgagcattacaatcag
cctgattggctcacgcaaatccaagcttatgctaacaaagtactgttatcgctgttcacc
atggagatgctgttgaagatgtacagcctgggactacaggcctattttgtcagcttcttc
aaccgctttgattgttttgtggtatgtggtggaatcctggagactgtcttggtagagttt
gagatcatgcaacctcttggaatctctgtgcttcgctgtgtccgcctcttacggatcttc
aaagtcaccaggcactgggcctcgctgagcaacctcgtggcctccttgctcaactccatg
aagtccattgcgtccttgctgctcttgcttttcctcttcattatcatcttctcattgctg
ggcatgcagctttttgggggcaagttcaactttgatgagacccagaccaagcgcagtact
tttgacactttcccccaggccttgctcacagtcttccagatcctgacaggggaggactgg
aatgcagtgatgtatgatgggatcatggcctatggcggcccctatttcccaggtatgctg
gtctgtgtctatttcatcatcctcttcatttgcggcaactatattctgctcaatgtcttc
ttggccattgctgtggacaacctggcagatggcgacaacatcaataccgccaaggagggg
gaacacaaggaaaaagaggcaccagcagagggggagcagagcaatgagaaagaagaagag
aaaaatgtgaaggtggaatgtggagaggaagaggaggaggaagtagaggaaggcagtgaa
gaagcaggtgaggaggaagaggaagaagaggcagaaggagatcagcagagcttggcagag
tctcacctagacaaactggaggaaacccccacagagaaggtgttaccaattcctgatgga
agttccttcttctgccttagcaagacaaatccgcttcgtgttgggtgccacaaattgatc
catcaccacattttcaccaatctcatccttgtcttcatcatcctcagcagcatctccctg
gcagcagaggaccctatccgagcacactccttccgcaacaatattctgggatactttgat
tatgccttcacttctatcttcactgttgagatcctactcaagatgaccgcttacggcgcc
ttcctgcacaaaggctccttctgccggaactggttcaatctccttgatctgctggttgtc
agtgtctcactcatctcctttggcatccactccagtgccatctctgtggtgaagatcttg
cgagtgctgagggtgctgcgccctctccgagccatcaaccgggccaaggggctgaagcac
gtggttcagtgtgtgtttgtggccatccgcaccattgggaacatcatgatagtcaccacc
ctgctgcagttcatgtttgcttgcatcggtgttcagctcttcaagggcaagttctacagc
tgcacagatgaggccaagcacactccgtatgaatgcaagggcacattcattgtctacaag
gatggagatgtggctcacccaatggtgcgggagcgtgcctggctcaacagtgacttcaac
tttgacaatgttttgtcgggcatgatggcccttttcactgtctctacttttgaaggctgg
ccagcgctactttacaaggctatcgatgccaatgcagaaaacgaggggcccatctacaac
taccgggtggagatctccatcttcttcattgtctacatcatcatcattgccttcttcatg
atgaacatcttcgtgggtttcgtcatcatcactttccgggcacagggagaacaggaatac
aagaactgtgagctggacaagaaccagcggcagtgtgtggaatatgccctgaaggcccag
ccgttacggcgctacatccccaagaacaaatatcagtataaattctggtacatggtcaac
tccaccggttttgaatacatcatgtttgtgctcatcatgcttaacaccattgcactggct
gtgcagcactatgaacagtcccagcccttcaactatgtcatggacctgctcaacatggtc
ttcacaggcctcttcactgtcgagatggtgctgaagatcattgccttcaagcccaagcac
tacttctgtgatgcatggaacacctttgatgctctgatcgtggtcgggagtgtagttgac
atcgcagtcactgaagtcaatagctcggaggacagctctcgcatctccatcaccttcttc
cgcctcttccgtgtcatgcgcctggtcaagttgctcagcaaaggcgagggcatccgcacc
ctgctctggaccttcatcaaatccttccaggctttgccatacgttgcccttcttattgcc
atgatcttcttcatctatgcagtcatcggtatgcagacctttggcaaagtcgccatgcag
gacagtacgccaatcaaccgcaacaacaacttccagaccttcccacaggcagtgctgctg
ctcttcaggtgtgcaacaggggaagcctggcaggagatcatgctggccagtttgcctggc
aaacgctgtgaccccgagtccgactatgagcctggcgaggagttcacttgtggcagcaac
tttgccattgtctacttcatcagcttcttcatgctctgcgccttcttgatcatcaacctc
tttgttgctgtcatcatggataattttgactatctgacccgggactggtccattctgggt
ccccaccatcttgatgaattcaagaggatctggtcagagtacgatccagctgccaagggc
cgcatcaagcaccttgatgtagtgactctgctacgccggatacagcccccgctgggcttt
gggaaactctgcccccaccgagtagcttgcaagaggctggtggctatgaacatgcccctg
aactcagatggaactgtcaccttcaatgccactctctttgccttggtgcggacatccctc
aagatcaaaacagaaggagacctggatgtggcaaataaggagcttcgtgcagtaatcaaa
aagatctggaagcggaccaagcccaaaatcctggatgaagttatccctccaccagaagag
gaggaggtcactgttggaaagttctatgccacattcctgatccaggattacttccgtaaa
ttccgtaagcggaaggagaaaggaatgcttggtccagatgggtccccaagcaactctact
gccttgcaggctgggttgaaaagtttgcaagatctggggcctgagatccgccgggccatg
tcctgtgacctggaagaagaggaggaagctgaggaaactgtgtgtgaggaggaaaccgtg
acctataagagctctgaggcattgtatggcagtgcacctgaccaccacatcacagctgct
tcaccagatggggagaacaagactctgatgaatggccttgtgggctcccggcacccctca
agcgtcagcctctcccacatgactaatggaccaacccactatgaggagaatgttgggggc
aatgatgaacctgctgaactgcccaacatccccacccggcgcaggatgagcaggcggagc
tctgatagcagcggcatcccacctacagtgcatgaagaagccacacacaccgaagactac
agggaggacacctcagtggagcagggatactatagccgggaagaggactctgagagcctg
gcctcccgtgacaggcagccctgtcttcacactccacagccccatcgtcgtcgttgggac
aacagctatggcggctctttgcccctcccttcccggcgcatcaacaatgggatggttaat
ggcatgctggatggcaggcaacccaagcgcaggcgcctcttgcctcccacacccacaggc
cgcaaaccagccttcagcatccagtgcctgcagcgtcaaggcagctgtgatgacatcccc
atcccaggcacctaccaccagaatgcaccaccctgccgagcacgtgcacagggctatggc
agctatgactcgtggcacagtggcagccactcctcaacagcatcctcacagtcgtgggcc
acaccacctaagcggggccggttgctctatgccccactaatcctggtggaggaggatggg
ttgccagggcacagctgggagaagaacagcaacagccttccgcccatgtcgcgagcgcgc
tggtacatgaatgagcctgagctgccctaccgctcttatggccagctgcgtgtgcccggc
ccactcaagcacagctacagcgacaagcctggcagtgctgacagcctggtggaggcggtg
ctcatctctgagggtctaggcctttatgcacgggacccaaagtttgtggccttcaccaag
cgggagattgctgatgcctgccacatgaccattgatgagatggagagtgctgccacagac
ctgctgagtcgcaaggtccctggtagcgaaagcagcggccgaggtggtggtggtcacgcc
ttgtacagcagtgatggggagcacagtggggctgggagcctaggtcccgtttacagcgat
gaggagcccttccgctcccatgaggaagaggacttgggtgacgagatggcctgcgtcact
tcttattga
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