Podarcis raffonei (Aeolian wall lizard): 128406917
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Entry
128406917 CDS
T09310
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128406917 (SEC16A)
Membrane trafficking [BR:
praf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128406917 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
SPACA7
Motif
Other DBs
NCBI-GeneID:
128406917
NCBI-ProteinID:
XP_053230767
LinkDB
All DBs
Position
Z:19049300..19088602
Genome browser
AA seq
2403 aa
AA seq
DB search
MQPPPQTIPTGAGGPPPLATSQNMYWRSNPFGKRATVPVSAAAGPVQPVTDPFAFGKQAP
QGTQFAASNNPRGNPPVVQDFSLAAFPPHAADSPHGLLSFSPAAPASQPGGNSAFSSVAA
PMPLFAPQVTNSAETPFSIEPGKRTHSPLGQHHSMGIALENSVSGHQGLAPMPDRPLSRQ
EAGGNPSNPASLSASLSFFSPAQQTVPQWKPSQGSSGPPQGQAYSSYPEPPSQNTHYAVT
QSAAGVSQPGPHMEPHQNSPQQPLVHNAAQAPLMYGDVSSMTSSQSSGHHHTAWQNTGAG
CPWPGHLPQEHFYLQPLETTYTLGNPTTQENESSAEPQGASEAASRQCPTNTDSGTVSMF
FKGDEAENEEILSSEGAEQASSSADTFQQTMGHTYYQPLHSQQIPAASFSPMQASTAEGL
EAQHPFRATCEPPDAQAGKSAAFLTEDKASLADARGPVSTQYENIENLECVPNQEVLPSE
PTNHSRLSPGVAPDPTRYTSLLGPSLPKSSATSRLERGPNLEAPDLLPHPIRSDSVSSNY
SSLSQWSLPSASQPQELGTFIQQESGKLPEEEASSSSSMGFFKQIDSSPLGGDGSRQSPG
KSYHHSGPLSHAPTPSPPKPMGVFQTSANSSFEPVRSHGLGVKPPEADQAKMVAELRESL
SSAKKSQATPVASPGNLEQPPDNLETLFVPRDYPLPLTLGSGAAGPLQPSGGSLAENVQS
VPEKKLPGRAQGNRKKCESPATTLWAQSEVPNFGGNVLLAPAAPAVQVPTKQAAQVLQPP
EEGLPGQQSLSPGSVPHPPSLAGNVSSENLENPPKLGEEEALRSQASSGYASLLSSPPTE
ALQNQPVLIAQPNQSYSLAQPVNFSLTDQLSKSESSHLAKDPGGGNKPLLGFHTSRNPHS
ETMPLGQPRPAGQASVSAAALSNSNFLQNPLGTSEMASNKPSPSLMHPASEGTFNLASES
QKASVSEGLPSDLSGKSRANASSVTSTPLTLATGPVNSSPKNSGSQELPRVLDFTVAKSL
EQSSTTSCTQVHNQSLSSGLVFGHPGRGENEVQDPQHFYQQVTKDVQLPGGTSPQQQQQQ
QQQQVASSGQPHAPSNPQVHPGSSSSQQPPGHRTYEADGGLVTYAQASMESKPVSSSQPQ
SAPAATSQTNAVTVAGQPAGIPSQHEPQHPPPSQTPCQTTFIQPQNPYYYYGHPYNSYPS
YQTPYPPVDPRTAHLYYQEHPYGRYDPASQHYDTTAPSRNARSYHQGEPERPSSRASHTS
DKPSSRQGYPEDYYNTKGGWNDYYSDYYVNPYDYGGPSRYPYDARYRDPSVYDQRYWDYP
EQHPYQKREAYPYANSHDQYEEHWQYDPRFTASFDDLEPRRNHYGDEFDRHSVHSEQSGH
SLRSSHSRRSSFSSRSQQSQLYRSNHDLTAGTYEANHQPVSLHTEYSYDHFAEQSPFMDS
YATQAAWMTVEQAPSRPLPPEKFSVPHVCCRFGPGGYLIKVLANLPSEGQPALVEIHSME
MVMQHSLEQEEMRAFPGPLTKEETHKVDVINFAQNQATRCFQNDTLIDKESARLLWDFII
LLCRQNGTVVGTDLAELLLQDHRTVWLPGKSPNEANLIDFTNEALEQAEEESGEAQLSFL
SDSLIATIGNLEKETDRFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRAHARVMT
RFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNMEVEHRTI
TTMGDTLASRGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSSPFSKFSTNEAIRRT
EAYEYAQSLGTQPCSLPNFQVFKFIYACRLAEVGLAAQAFHYCEVISKAILKNPCYYSPV
LISQLIQISPRLRLFDPQIREKPEQEFFDEPDWLVQLRSLDGQIKEGGIAYSAGRSTPQQ
YACSTPSSELDHVSQSEGMGAGHEMLSGSDNPLLASLLPGTGHPVQPSVQLMPSAPQAIL
DSSVTAAPSSHSEVTGHTPFYPAAPPSTGPGPSYAHAYGAEQNPPYPTMGMVPQTGPSSQ
ANELQLQEQLNQDAGVQGGSQETQAWKARPEPREDDFYGKMASMQGSGRRSRSTSQSSSV
HMGFGVRSRTTSESSVHSVGRERRNSAAKQPSPPPPPIPEGKPSKKEPEPRKSGATWLGW
LMGKGKNEAHLPDDKNKSIVWDEKKQRWVNLDEPEEESKPPPPPPSGFPQVPQAVSSGSG
GPPNSSVNMFSRKAAGSRARYVDILNPGGAKSPSGGAAPPAPSDLFAPLAPMPIAANLFV
PNSVPEDQLPLEEKGAGGQLMPGSQSNPGVAAEPSYLNSAVLPPGSELPPSNPEDSQPGE
LSRSSSMSSLSREVSQHFNQPPSGGPPAGTVQFYNPSQFVQSAAASGNSRHGRIGQRKYP
TLK
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctccgccacaaaccatccccactggggcaggcgggccccctccactggcaaca
tcacagaacatgtattggcgaagcaatccgttcggcaagcgggccaccgtgccagtctct
gcagccgcaggcccggtgcaacccgtgacagacccctttgcctttggcaagcaagcccca
caaggcacccagtttgctgccagcaacaaccccagaggcaatccacctgttgtgcaagac
ttttctctagcagcgtttcctccacatgcagcagacagtcctcatggtctgctctcattt
tccccagcagcgcctgcctctcaacctggaggaaacagtgcattttcgagtgtggcagcc
cccatgccattgtttgctccacaagtcacaaacagtgccgaaacgccttttagcattgag
cctggcaagcgtacccatagccctctggggcagcatcattccatggggatcgctcttgaa
aattctgtcagcgggcaccaggggttggctcctatgccagacaggcctctgagcaggcag
gaggctggtgggaatccaagcaaccctgcttccctgtcagcgtctttgtctttcttctct
cctgcccagcaaactgtgcctcagtggaaaccctcccaagggagctcagggccacctcag
ggccaggcttattcttcctacccagagccaccatcccaaaacacccactatgctgtaact
cagtctgctgctggtgtttcccagccaggtccccacatggagccccatcagaattctccg
cagcagcctctcgttcacaatgctgctcaggccccattgatgtatggcgatgtctccagc
atgacttccagccagagctctggtcaccatcacactgcttggcaaaacacaggagcaggg
tgcccttggcccggccacctccctcaagaacacttttacctgcaacctcttgaaacaact
tacactcttggcaatcccaccactcaagaaaacgaatcctcagctgaacctcaaggcgca
tctgaagcggccagcaggcagtgcccgaccaatactgattcaggtacagtttccatgttt
ttcaaaggagatgaggctgagaatgaggaaatcctttcatcagaaggagccgagcaggcc
agcagcagcgctgacacttttcaacagacgatgggccacacatactaccagcccctccac
tctcagcagatcccggcagcgtctttctctcctatgcaggcaagcacagctgagggcctg
gaagctcagcatcccttcagagccacctgtgagccacctgatgcccaggctggcaaaagt
gcagccttcctcactgaagacaaagccagccttgccgatgctcgagggcctgtcagtacg
cagtacgaaaacattgagaacctggagtgcgttccaaaccaggaagtcctgccgagcgag
cctacaaaccacagtcgtttgtctcccggggtggccccagatccgaccaggtacacctca
ctgctaggcccatcactgccgaagtctagcgccaccagccgtctggaaagagggccaaac
cttgaagcgcctgatctgttgcctcaccccatccggtccgacagtgtctcctccaactac
agcagcctgagccagtggagtctccccagcgcatctcagccacaggagctgggcacattt
atccagcaggagagcgggaagctcccagaggaggaggcatcatcgtcttcctccatgggc
ttcttcaagcagattgattcctcccctttgggaggggatggtagcaggcagagccctggc
aagagttaccaccacagcggccctctgtcccatgcacccaccccaagcccccccaagccc
atgggggtctttcagacgagcgccaacagttcattcgagcctgtcaggtcgcatgggttg
ggggtcaagccccctgaggctgaccaagcaaagatggtggccgagctgagagagagcctt
tcaagtgccaagaagagccaggccaccccagtcgcctcaccggggaacctggagcagcct
cccgataatctggagacccttttcgtgccccgggactaccccttgcctctcacattgggg
agtggtgctgcagggcctctgcaacccagcggtgggtccttggcggaaaacgtgcagtcg
gtccctgagaagaaactgccaggcagggcccagggaaacaggaaaaaatgtgagagccca
gccactacgctctgggcccaaagtgaggtgccaaattttggggggaatgtgctgttggcc
ccggctgctccagcagtgcaggtgccgaccaagcaggcagcccaggtgctccagccaccc
gaggaaggtttgcctggccagcagtccctctcaccagggtccgttccccacccaccatcc
ctggctgggaatgtgtcttccgaaaacttggaaaaccctcccaagctgggggaagaagag
gctcttcgctcccaggcgagttcgggttacgcaagcctcctctcctccccacctacggag
gctctgcagaaccagcccgtcctgatcgcccagccgaatcaaagctacagcttggctcag
ccagttaatttctccctcactgatcagctgagcaagagtgaaagcagccacttggcaaaa
gatcccgggggtggcaataagcctctgctgggcttccacaccagcagaaaccctcatagt
gaaaccatgcctctggggcaacccagacctgcaggtcaggcatctgtttctgctgctgct
ctgtcaaattctaattttttacaaaatcccctcggcacttctgaaatggcctcgaataag
ccttccccctcactgatgcacccagcctccgaaggcaccttcaacttagcttccgaaagc
caaaaggctagtgtttcagaagggcttccttcagacttgtctggcaagtctagggctaat
gcctccagtgtgacgtcaacccctctgaccctcgctacgggccctgtgaacagcagtccc
aagaactcaggcagtcaggagcttcccagagtactagatttcacggtagcaaagtcccta
gagcaaagcagcaccaccagctgcacccaggtgcataaccagtcactctccagtgggctg
gtgtttggtcaccctggccgaggggagaatgaggttcaggatccacagcatttctatcag
caggtcacaaaagatgtgcagcttccgggtggcacttccccccagcagcagcagcagcag
cagcagcagcaggtagcatcctcagggcagccccatgctccgtccaacccccaggtgcat
cctggaagcagctcttcccagcagcccccaggccacaggacttatgaggctgatgggggt
ttggtcacctacgctcaggcgtccatggagagcaagccagtgtcgtcgagccaacctcag
agtgctccggctgccaccagccagactaatgcagtgacagtggctggtcagccagccggg
atcccctctcagcatgagccgcagcacccgccgccttctcagaccccctgccagaccacc
ttcatccagccacagaacccttactactactatgggcacccctacaacagttatccttcg
taccagacgccataccctccagtggaccccaggactgctcacctttattaccaggagcat
ccatacggccgatatgatcctgcctcccagcattatgacaccacggcacccagtaggaac
gctaggagctatcatcagggggagccagaacgccccagctccagagcaagccacacctct
gataaaccctcctccaggcagggatatcctgaagattactacaacaccaaaggcggatgg
aatgattactactcggactattatgtaaatccctatgattatggaggtccaagccgttac
ccatacgacgccaggtacagagaccccagtgtttacgaccagaggtactgggattaccca
gaacagcacccttaccaaaagagagaggcctatccctacgcaaacagccacgaccagtat
gaggagcactggcagtatgacccccgtttcaccgccagttttgatgacctagagcctcgc
cggaaccactatggggacgagtttgaccgacacagtgttcacagcgaacagtctggccac
agcctgcgcagctcccacagccggcggagcagcttcagctcgcgctcccagcagagccag
ctgtatcgaagcaaccatgacctgacagctggcacctatgaagcgaatcaccaaccagtc
tcactccacacagagtattcctatgaccactttgccgagcagtcccctttcatggacagt
tatgcaactcaagctgcgtggatgactgtggaacaagccccttcaaggcctctgccgcct
gagaaattttcagtgccccatgtctgctgcaggttcggtcctgggggctacctgatcaag
gtcctggcaaacctgccttcagaggggcagccagctttggttgagatccacagcatggag
atggtgatgcagcactctctggagcaggaggagatgagagccttccctggccccctcacc
aaagaagagactcacaaagtggatgttatcaattttgcccagaaccaagccacccggtgt
tttcagaatgacactctgatcgacaaggagtctgcccggctcctctgggacttcatcatt
ctcctgtgcagacagaatgggacagtcgtgggcacagaccttgctgagctcctgctgcag
gatcatcgcacagtgtggctcccagggaaatcacccaatgaagctaacctgattgacttc
acgaacgaggccctggagcaggcagaggaggagtctggagaagcccagctctccttcctc
tcagacagcctcatcgccaccattggcaacctcgagaaggagacagaccggttccgggag
ctcttgctctatggccgcaagaaggacgctctggaatcagccatgaaacacgggctctgg
ggccacgctttgctgctggccagcaagatggacagtagggctcacgcaagagtgatgacc
aggttcgccaacagcctcccaatcaacgaccccctgcagactgtctaccagctcatgtcc
gggaggatgcccgcagcatccacatgctgtggagatgagaaatggggagactggagaccc
cacttggcaatggtcctttccaacctgacaaataacatggaggtggagcacaggacgatc
accaccatgggcgacacgcttgcttcgagaggcctcctagatgctgctcacttctgctac
ctgatggctcaggttggattcggagtctacacaaagaaaacaactaagctggttctgatt
ggctcaaaccacagttcacctttttcaaagttctccaccaatgaagccatccgaaggaca
gaagcctacgaatatgcgcagtccctggggacacagccatgctcgttgcccaatttccag
gtttttaagtttatctatgcctgtcgactggccgaagtggggctggccgcacaggccttc
cattactgtgaagtgatttccaaagccatcctcaagaacccctgttactattccccggtc
ctgattagtcagctgatccagatctcccctcggttgcggctctttgaccctcagataagg
gagaaacctgagcaggaattttttgatgaacctgattggttggtacaacttcgaagctta
gatgggcagatcaaggagggcgggatcgcttacagcgcagggagatccacacctcagcaa
tatgcctgcagcacaccaagctctgaactggaccatgtcagtcaaagcgaggggatgggg
gctggtcatgagatgctatccggctctgacaacccactcctggcctctttgcttcctggc
acaggtcaccctgtgcagccgagtgtccagctgatgccttccgctccccaggccatcctt
gacagctcagtcactgcggcaccttcttcccattcagaggttactggccatacgcctttc
taccctgcggctcctccttctacagggccaggacccagctatgcccatgcctatggagcc
gagcagaaccctccataccccacgatggggatggtgccacaaacaggtccatcctctcaa
gcaaatgagcttcagctgcaggagcagctcaaccaagatgcaggagtgcaaggcggctcc
caggagactcaagcttggaaggccagaccagagcccagagaggatgacttctatgggaag
atggcaagcatgcagggctcgggccgacgatccagatccacctcccagtcttcttcagtt
cacatgggcttcggggtgcgatcccggaccacctcagaatcctctgtgcactctgttggg
cgcgagaggcggaactctgcagccaagcagccctccccgcccccaccgcccatcccagaa
gggaagccaagcaaaaaagagcctgagcctcggaagagtggagcaacgtggcttggctgg
ctgatggggaaaggcaagaacgaagctcacctccctgatgataagaacaaatcgattgtc
tgggatgaaaagaaacagcggtgggtcaacttggatgaaccggaggaagagagcaagcca
ccacctccacctccttcagggttccctcaggtccctcaagcagtttcctctggatcagga
ggacctcccaacagctccgtaaacatgttctccaggaaagcagcaggaagcagagcccgg
tatgtcgacatcctgaaccctggtggggccaagtcacccagtggtggtgctgcgccccct
gctccatcagacctctttgctcccctggcccccatgcccatcgcagcaaacctcttcgtc
ccaaactcagttccagaggatcagctgcctttggaggagaaaggggcgggagggcagctg
atgccaggaagccagagcaaccctggagtggctgcagaaccctcatacttaaattctgcc
gtgttgccacctggctctgagctccctccctccaacccagaggactcccagcctggagag
ctttcgcgctctagctcaatgagctcattatcacgtgaagtaagccagcattttaatcag
ccaccttcaggaggacccccagccggcacagtccagttttacaacccttcccagtttgtg
cagtctgctgcagcttcaggaaactcaagacatggcagaattggacagagaaaatacccc
accttaaaatag
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integrated database retrieval system
