Podarcis raffonei (Aeolian wall lizard): 128408410
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Entry
128408410 CDS
T09310
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128408410 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128408410 (MBD4)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128408410 (MBD4)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
128408410 (MBD4)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128408410 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
128408410
NCBI-ProteinID:
XP_053234062
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All DBs
Position
2:89745019..89754658
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AA seq
554 aa
AA seq
DB search
MSLALVQGATGQPGGSDIGNRHLTEDADKEKGHLITAGGECVDPKEEDTETITESLTWCK
ESEATVSFLAPLCRKAVPEGWERIIKQRQSGKTKGRYDIYFVSPQGVKVRSRRALLDYFK
KNGETVLKSEDFDFSVSVRESILSSTRALGAEGQNCITSSQTLDLGLQSSEEKQNKILEF
QTSASEPDLQDGPTAEDPSKDSCFKAQERSTAQRKTQIKKAKCGSEMGNLDDAYNTRRRK
RPPKSQRAETVKNPRRKKDTYIFNSVHKVCQRGSRKRKTCLKDELLVSEPKVELHVGPVA
AVLEHKSSTEVLKCDEDPTSVVSVAADENFSELENQRNRVPSGSQELNIASNMEVTDSQT
SDESHFTSVKEDNFRRPQVERRKTSPYFSSKFIQGAPSPPRRKAFRKWTPPRSPFNLVQE
TLFHDPWKLLIATIFLNKTSGKMAIPVLWEFFKKYPSPEIARAANWKEMAELLKPLGLYE
LRAKTIIKFSDEYLVKQWRYPIELHGIGKYGNDSYRIFCINEWKEVTDTAIFLNQWKIKC
SAFDFCNACWMNNI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgctagttcaaggggcgacggggcagcctggcggcagtgatataggtaat
aggcacctgactgaagatgcagacaaagagaaagggcatcttataacagcaggaggggaa
tgtgttgatcccaaggaggaagatactgagaccatcacagaaagtctaacttggtgcaaa
gagtctgaagcaactgtatctttcctggctccgctgtgtcgcaaagctgttcctgaagga
tgggaaaggataataaagcaaagacagtctggcaaaacaaaaggaagatacgacatctat
tttgtcagtccccaaggagtgaaggtcagatccagacgtgcacttttggattactttaaa
aagaacggagagactgttcttaaatcagaggacttcgatttttctgtctctgttcgggag
agtatcctatcaagcacaagggctctgggggcagaaggacagaactgtatcactagcagc
cagactctagatcttggactgcaaagcagtgaagaaaagcaaaataagattttggaattt
caaaccagtgctagtgagccagatttgcaggatgggcccactgcagaggacccctcaaag
gattcctgtttcaaagcccaagagaggagtactgctcagaggaagactcaaattaagaaa
gctaaatgcggttcagaaatggggaatctggatgatgcctataacacaagacggaggaaa
cgacccccaaaaagtcaaagggcagaaactgttaaaaatcccagaagaaaaaaagataca
tacatttttaacagtgtccataaagtgtgccagagaggctcaagaaaaaggaaaacatgc
ttaaaggacgaactgctggtttctgaaccaaaagtggagttgcatgttggaccagtagct
gctgtcttggaacacaagtcaagcacagaagttttaaaatgtgatgaggatcccaccagc
gtagtttctgtagcagctgatgaaaatttttcagaattggaaaaccagagaaacagggtg
ccttcagggagccaggagttaaacattgcttccaatatggaagttactgactcacagacc
agtgatgagagccattttacatcagtaaaagaggacaattttcgaagacctcaagtggag
agaaggaaaaccagtccatatttttctagtaaattcattcaaggagctccaagcccacct
agaaggaaggcctttcggaaatggactccacctcgttctccttttaatttggtccaagaa
acactctttcatgatccatggaaacttctcattgcaactatctttctgaataagacctca
ggtaagatggccatccctgtgctctgggaatttttcaagaaatatccttcacctgaaatc
gcaagagctgcaaactggaaggaaatggcagagttgcttaaacctcttggcctttatgaa
ctcagagcaaagaccatcatcaaattttcagatgaatacttggtcaaacagtggaggtat
cctattgagttgcatgggattggaaaatatggaaatgactcttacaggatcttttgcatc
aatgagtggaaagaggtaactgatactgccatcttcttaaatcaatggaagattaagtgt
tctgcttttgatttttgtaatgcctgttggatgaataacatctga
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