Podarcis raffonei (Aeolian wall lizard): 128415671
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Entry
128415671 CDS
T09310
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128415671 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128415671 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128415671 (USP1)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128415671 (USP1)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128415671 (USP1)
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128415671 (USP1)
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128415671 (USP1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
128415671 (USP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128415671
NCBI-ProteinID:
XP_053248190
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All DBs
Position
6:complement(39306337..39320246)
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AA seq
781 aa
AA seq
DB search
MPGVLPSDSSGLSRGTPTKRSRLSLKFFQKRETKRALDFAESAENEQKTSEYECSEIDQV
VPATQPLSPSPICCEKKDNMLPFVGLNNLGNTCYLNSILQVLYFCPGFKTGVKQLFNIIT
NKKESLKGDTDKGGIKEDSLASYELVCSLHSLIVSVEQLQASFLLNSDKYTELATQPRRL
LNTLRELNPMYEGYLQHDAQEVLQCILGHIQETCQLLKEQLKPRSLEEPTAELKKITNQD
IGSTGIVEEDVSLISDQAIEDGEDKTNGNAKRKNDTEDGNEKKKSKVSKEKNGIEENQRR
TRSKRKALEEKLENQSEATIKHCIENENTKPTHKKSRLRLNWLKSSSKQPSILSKFCSLG
KLTTNLGFKEPVKEIENSGFTDSFHKCENGSQGTEDYCDPSSIESTAEKEIEKQCQRGSE
LAVFDLVERLFQGQLVLRTRCLECESFTERREDFQDISVPVQKEELSKTEENSEISPDPK
TEVKTLKWAISQFASVERIVGEDKYFCENCRHYTEAERSLLFDKMPEVITIHLKCFAARG
LEFDCYGGLSKINTPLQTPLKLSLDDWSINPGNEIYGLFAVVMHSGITISSGHYTASVKI
TNLDSLELDKDNLTSDPFCKIHPEPLNEQEARAVTEDYDDGEVSFRVSGSAQPNKGLNKK
NIEAVGLLGGQKSKLNCDLPSNKATHSEMMANIVTETKNAEHSHAKGIAEFERCEQTDPA
IGLENKAMHIMQSLKEYEGKWLLFDDSEVKVTEEKDFLNLLSPISSSTSTPYLLFYKKIV
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgtgctgcccagtgacagtagcgggctttcaagaggcacccccacgaaaaga
agcagactttcactgaagttctttcagaaaagggaaacaaaaagagctctggattttgca
gaatcggcagaaaatgagcaaaagacttcagaatatgaatgttctgaaattgaccaggta
gttcctgcaacacagccactttcaccgtcgcctatctgctgtgagaagaaagacaacatg
ctacctttcgtgggcttgaacaatcttggtaacacgtgttatcttaacagtatacttcag
gtgctttatttttgccctggctttaagactggagtgaaacaactatttaatataattaca
aacaagaaggaaagcttaaaaggtgacactgataaggggggaattaaagaagattctctt
gcaagctatgaattggtctgcagtttacactccttgattgtttcagttgaacagcttcag
gccagctttctcttaaattctgataaatacacagaacttgcaactcagccaagaagacta
ctaaatacgcttagggaactgaaccccatgtatgagggatacttgcaacatgatgcccaa
gaagtattgcagtgtatattgggacatatccaagaaacatgtcagctgttgaaggaacaa
ctgaaacccagatcactagaagagcccacagctgaactaaagaaaattactaatcaggat
attggcagtactggtattgttgaggaagatgtcagtttgatctctgaccaagctattgag
gacggtgaagataaaactaatggaaatgcaaaaagaaaaaatgatacagaggatgggaat
gaaaagaaaaaatccaaagtttccaaagaaaaaaatggaatagaagagaatcagagacgg
accaggtcaaagagaaaagccctggaggaaaaactagaaaatcaatctgaagcaaccatt
aagcattgcattgaaaatgaaaatacaaaaccaacccataaaaaatccagacttcgatta
aattggttaaaatcttcaagcaagcaacctagcattctgtccaaattttgtagtttggga
aagctgacaacaaacttggggttcaaagagcctgttaaagaaatagaaaactctggattc
acagacagtttccacaagtgtgaaaatggcagccaaggaacggaagactattgtgatcca
tcatctattgaaagcactgccgaaaaagaaattgaaaaacaatgccagagaggttcagag
ttagctgtcttcgatttagtggagagactcttccagggtcagttggtgttacgaacacga
tgtttagagtgtgagagtttcactgagagaagagaagactttcaagatattagtgtgcca
gtgcaaaaagaagagctctcaaaaacggaagagaattctgaaatttctccagatcccaaa
acagaagtgaagactctgaagtgggcaatttcccagtttgcttcagtggagaggattgtg
ggagaagataaatatttctgtgaaaactgtcgtcattacacagaagctgaacgcagtctt
ctatttgacaaaatgcctgaagttataaccatccacttgaagtgcttcgcagctagaggg
ttagagtttgattgttacggtgggctgtccaagataaatactcctttacaaacacctctc
aagctgtctttggatgactggagcataaacccaggcaacgaaatatatggattgtttgct
gtagtgatgcacagtggtattacaatcagcagtgggcactatacagcctctgttaaaatt
acaaatttggatagcttggaattggacaaggacaacttaacaagtgatccattttgtaaa
attcacccagagccactgaatgaacaagaagcaagagctgtcactgaggactatgacgac
ggtgaggtctcctttagagtcagtggaagtgctcagcctaacaaaggactgaacaaaaag
aatatagaagctgtggggcttcttggaggacaaaaaagcaagctgaactgtgatttgcca
agcaacaaagcaacccattctgagatgatggctaacatagtcactgaaactaaaaatgca
gagcatagccatgctaaaggaattgcggagtttgaacgctgtgagcaaactgatcctgct
attggactagaaaataaagcaatgcatataatgcagagcttgaaagagtatgaggggaaa
tggctactttttgatgattccgaagtgaaagttacagaggaaaaagactttctcaacctt
ctgtcccccatttcctcatctacatctactccttacctgctgttttataagaaaattgta
gagtga
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