Podarcis raffonei (Aeolian wall lizard): 128419882
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Entry
128419882 CDS
T09310
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
praf03037
]
128419882 (CROCC)
Cilium and associated proteins [BR:
praf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128419882 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
128419882
NCBI-ProteinID:
XP_053257070
LinkDB
All DBs
Position
8:complement(81204162..81274062)
Genome browser
AA seq
2036 aa
AA seq
DB search
MSNAEAAELKLEAAVQKVEDSILISAEGKSLSVRGSCEDSPPTRLPARIREIVTKNLSQS
DCQVASHAEMSSLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEQALR
LESGEREREALENKSLAQQNVELRRRLEEEQAGYKRKLQAYQEGQQRQAQLVQKLQAKVV
QYKKKCGEQEEQLLEKSTELEQQRLVSRLDITESRLRQEEEHSSDLESALIRLEEEQQRS
TSLAQVNAMLRDQLDQANTANQALSEDIRKLTADWTKARDELEQREVDWRREEETFNTYF
RNEHSRLLTLWRQVVGFRRHFGEMKTTMERDLSELGHELSRSSRTVHAACLNLSSNLRLS
ESSTGATLEKQALLMAQLEEQLKDKVRDMIQLQVRCDMEKAELGNRINEVTSSLERLKGQ
NAEKTKAIEALTQKLESLEASRAQEQAAAEAEEVEALRTESELLQQTLRDLAQAVISDAD
SAVHLPATETSDSDATGLSLRGLSSSFRTPSPLRRSSPHRRSLSPIFPDSTLAVVQSALQ
KRQLQLQDLRGKYEAAQDLVSSLKRQLAESDNERRSLEQKILQLKGDLDRLLQAKEDAAH
DANRFRSSAELLGSEKTNLEKNLQLLQQKLEVLHQEKEKLQLANSDLQRQRDGLEEEKED
ILKDQERARKEIERSRKQLEQLEAKKSGLKKELVLVKEALSKALLEKEVSQHEKAEGDEA
LSKAEASRAELELALSRLKSEESSLRDSLSKMSALNEGLAQDKMELNRIIIQLEEEKASL
LGKKQEVEQEKATIRDELVRLEQEKLDLDTERHGLGHSLQAVEQSRATLEQEVLVLQKER
GQLQEQLGQLSRHRSATGEELGQVRRELERHSEASLRAAKEKESLMKEKASLVVQLAASE
RENRGLAEEISGLRSEKDALETTLFEIQQHLAQLETRKEQLEAERQGLLHAKEALQAELA
AVRKEMEAEVSRLERDKDLSAQKLIQTEQETQAALKSAQADHEEDVERLQREKEALRLEL
EAEREEMLQRLSQEREEILARHEAEKEELSEEITSLQQERDEGLLLAENEKQQALSLKES
EKAILLEKLSGVQQSLASVSLEAERHKRDAQSLQEQERSTINALNSELRGLRAQFEEAIM
GHEREVKVLHEQARDLMKQRELALREVEELKMQVQLVEDARDQTRRELLEAHRKSREVHE
ALEAQRKEAVDLRRSLSDEAKEKEALQRSNGELRVAVKRAESERVSLKRANEEKEQKVAI
LEEARAAVGKEAADLRSSLQDVERSRLEARRELQELRRQVKMLDSENTKKSQEVAELQAR
VALDEQRDEESRRESFSLKQKIVESEATRESTRKELLNLQRKMVDLEGEFRLRERGLLGS
LEEARGNEKKLMDNGRNLEIKLEKAQAEGAELSLRLSASEGRVHGLEAELARVEGLKRDV
EFKLGRLHSALRRTMGIGHGGHAPSPAFRARGGSPKRLFSPPKGDVTADGPSSPTPQAGS
LASRPLSPELAGSPSRSEQLVADIDPEVVRSALRDFLQELRETQRERDEARSQLSTLNGQ
LAEMEAERDVSVTRVQQLQKQVAECDEGRRSADGKLSGAQTALMQQEETLRRNERERKAL
ADRLAALERSLQAADSERRATQEKIGKMKASEAKLELEKRRLKDILDASESRSTKLELLR
RSLEGELQRSKLVLSDREAEIQGLHDRIDILQRQVSEAEQKASALQLSLDRLSLSLAKAT
EAESSLKEKVQGLSASLSESQNSASSAQEKVLQLQKALAASEHDRRVLQERLDAARQAVS
EAKKQNGILSEQLQAMKGQQGELELQKEELEGLVKQQEELLRQSQESEAIGLRSLQKVQG
DRRLFQERVSSLQRALAQLENEKREAERSSLRLEKDRNALRKTLDKVEREKLKTHEDSVR
LSAEKGRLDRSLASLEQELTEAQQQIRLLEAQVAELEQAQTRVDSSTRHWQDLQLEAERL
HSSQLQAEHTLDARERAHRQRVKGLEEQISTLKEQLHQEVRKGQAKFTPASILSAP
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcggaggctgcggagctgaagctggaggctgcggttcagaaagtggaagac
agcatcctgatctcagcagaagggaagagcctctctgtcaggggctcctgcgaagactct
ccacccacccgcttgccggctaggatccgggaaatcgtcaccaagaacctctcgcaaagc
gattgccaagtggcctcccacgccgagatgtcgtccttgctttccctccaggaggagaac
cgcatcttgcagcaggagctttcccgggtggaagatttgctggcccagagccgggctgag
cgggatgaactggccatcaagtacaacgccatcagtgagcggctggagcaagcgctgcgc
ctggagtcgggtgagcgggaaagggaggcattggagaacaagagcttggctcagcaaaac
gtggagctgcgccggcggctggaggaagagcaggcaggctacaagcggaagctccaggcc
taccaggagggccagcagcggcaggcccagctggtgcagaagctgcaagccaaggttgtc
cagtacaaaaagaagtgtggggagcaggaagagcaactgcttgagaaatcgacggagctg
gagcagcagcgcctagtgagccgtctggacatcacagaatcacgcttgcggcaggaggag
gagcacagcagtgacctggaaagtgctctaatccggctggaagaagagcaacaaaggagc
accagccttgcccaggtcaatgccatgctgagggaccagctggaccaggcgaacacggcc
aaccaggccctcagtgaggacatccgaaagctgacggctgactggaccaaagcccgggat
gagctggagcagcgggaggtggactggaggcgagaggaggagactttcaacacgtacttc
cgcaacgagcacagccgcctgctcaccctctggcggcaagtggtggggttcaggaggcac
tttggggagatgaagaccacgatggaaagggacctctctgagctgggccacgaactctcc
cgctccagccgcacggtccatgctgcctgcctgaacctgagcagcaacctgcgcctgtca
gagagcagcaccggtgccaccctggagaagcaggcgctgctgatggcgcagctggaggag
cagctgaaggacaaggtccgcgacatgatccagctgcaggtccgctgcgacatggagaag
gccgagctgggcaacaggatcaacgaagtcacgtccagcctggagcgcttgaaaggccag
aacgcggagaagaccaaggcaattgaggcgctgacccagaagctggagagtttggaagcc
tcccgtgcacaggaacaggctgcggctgaagccgaggaggtggaagccctgcggacagaa
tctgagttgctgcagcagaccctgcgggacctcgctcaggctgtgatctctgacgcggac
agtgccgtccacctcccggccacggaaacctcagacagcgacgccaccgggctcagcctg
cggggcttgtcctccagcttccggacgccctctccgctgcgccgttcctccccccaccgc
cgcagcctgtcccccatcttccctgactccacactggcggtggtgcagtcggccctgcag
aagcgccagctgcagcttcaggacctccgggggaaatacgaggctgcgcaggacctggtg
tcatccctgaagaggcagttggcagagagcgacaacgagcgccgttccctggagcagaag
atcctgcagctgaagggggacctggacaggctgttgcaagccaaggaggacgcggctcac
gatgccaaccgctttcggtcttccgccgaactgctgggcagcgagaagacgaacctggaa
aagaacctgcagcttttgcagcagaagctggaggtcctccatcaggaaaaggagaaactg
cagctggccaacagcgaccttcagcgacagcgtgatggcctggaagaggagaaagaggac
atcttaaaggaccaggaacgggctcggaaggaaattgagcggagtcgcaagcagctggag
cagctggaagcaaagaagtcaggcctgaagaaggagcttgtgctggtgaaggaagccctg
agcaaagcccttctggagaaggaggtctctcagcatgagaaggccgagggcgatgaagcc
ctgtccaaggccgaggcgagccgggctgagctggagctggccttgagccgcctgaagtcg
gaggagtcctccttgcgcgactcgctctccaagatgagtgccctcaacgaggggctggca
caggataagatggagctcaaccggataattatccagctagaagaagagaaggcttctctc
ttggggaagaagcaggaagtggagcaggagaaagccacgatccgggacgagttagtgcgg
ctggagcaggagaagctggacctggacacagagcgccacggattgggccactccctgcag
gctgtggagcagagccgggcgacgctggagcaggaggtgctggtgctgcagaaggagagg
gggcagctccaggagcagctgggacagctttcccgccacaggagtgcaaccggtgaggag
ctggggcaggtgcgaagggagctagaacgccacagtgaagcatctctgcgggcagccaag
gagaaggagtcgctgatgaaggaaaaagccagcctggtggtgcagctggcagcctcggag
cgagagaaccggggcctggcagaggagatctctggcctcaggtctgaaaaagacgccttg
gagacgaccctctttgagatccagcagcacctcgcccagctggagacccggaaggagcag
ctggaagccgagaggcagggcttgctccatgccaaggaagccttgcaagcggagctggct
gccgtccgcaaggagatggaggccgaggtgagccgactggagcgagacaaggacctgtcg
gcccagaagctcattcagacggagcaggaaacccaggccgccttgaagagtgcgcaggcg
gatcacgaggaggacgtggaacgtctccagagggagaaagaggcgctgcgcctggagctg
gaagcagagcgcgaggagatgctgcagcggctgagccaagagcgcgaggagatcctggcc
cgccacgaggcggagaaggaggagctgagcgaggagatcaccagcctccagcaggagcgg
gacgagggactccttctggccgagaatgagaagcagcaggcgctgtctctcaaggagtcg
gagaaggccattctactggagaagctttcaggggtgcaacagagtctggccagcgtcagc
ctggaggcagagaggcacaagcgagacgctcagagtctgcaggagcaagagcggagcacc
atcaacgccttgaactcggagctgcggggcctgcgtgcccagtttgaggaagccattatg
ggccacgaacgggaggtgaaggtcctccacgaacaggccagggatctgatgaagcagcga
gagttggccctccgcgaggtggaggagctgaagatgcaggtgcagctggtggaggacgcg
agggaccagacccgccgggagctgctggaggcgcaccgcaagtcgcgggaggtccacgag
gccctggaggctcagcgcaaggaggccgtggacctgcggaggagcctgagcgatgaggcc
aaggagaaggaggccctgcagaggtccaatggagagctccgcgttgctgtgaagagggcc
gagagtgagcgcgtcagtttgaagcgggccaacgaggagaaggagcagaaagtcgccatc
ttggaggaggcccgggcagctgtgggcaaggaggcagccgacctccgcagcagcctccaa
gacgtggagcgttcgcggctggaggcccgccgggaactgcaggagctgcggcggcaggtc
aagatgcttgacagcgaaaacaccaagaaaagccaagaggtggctgagctgcaggcccgg
gtggccctggatgagcagcgggacgaggagagcaggagggagtctttcagcctcaagcag
aagatcgtggagagcgaagccacacgggagtcgacccggaaggagctcctcaacctgcag
aggaagatggtggacttggaaggcgagttccgcctgcgggagagaggccttctggggagc
ctggaggaggcccgcggcaacgagaagaagctgatggacaacggccgcaacctggagatc
aagctggagaaggcgcaggccgagggggctgagctgagcctgcggctgagcgcctccgaa
ggacgggtccacggcctggaagcagagctcgctcgcgtggagggcctgaagcgtgacgtg
gagttcaagctgggccggctccactcggccctccggcgcaccatgggcattggccatggg
ggccacgcccccagccctgctttcagggcccgtggcggctcccccaagaggctcttctcc
cccccgaaaggggatgtcaccgcagacgggccaagcagccccacaccacaggcaggcagc
ttggcctcccgccccctctccccggagctcgctggctcccccagccggagcgagcagctg
gtagccgacatcgacccagaggtggtgcgctccgcactccgggacttcctgcaagaactg
agggagacgcagcgagagcgggacgaagcccgttcccagctgagcaccttgaacggccag
ctggcagagatggaggccgagcgggacgtctctgtgactcgtgtgcagcagctgcagaag
caggtggccgaatgcgatgaagggaggcgcagtgcagacgggaagctgagcggtgcccag
acggccctgatgcagcaggaggagaccctgcgccggaacgagagggagcgcaaggccctg
gcggacaggctggctgcactggagcggagcctgcaggcggccgacagcgagcgcagggcc
acccaggagaagatcggcaagatgaaggccagcgaggccaagctggagctggagaagcgt
cgcctcaaagacatcctggatgcgtccgagagccgtagcaccaagttggagctcctgagg
cggtcgctggagggcgagctgcagaggtccaagctggtgctgagcgaccgcgaggcggag
atccaggggctacatgacagaatcgacatcctacagagacaggtgtctgaggccgagcaa
aaggccagcgccctgcagctctccttagaccgcctcagtctctctctggcgaaggctacg
gaggccgagagctccctgaaggagaaggtgcaggggctcagtgcctccctctccgagagc
caaaacagtgccagctcagcccaggagaaagtgctgcagctgcagaaggccctggcggcc
agtgagcacgaccggagggtcttgcaggagcggctggatgcggcccgccaggccgtctcg
gaagccaagaagcagaacgggatcctctccgagcagctccaggcgatgaaggggcagcag
ggggagttggagctgcagaaggaagagctggaggggctggtcaagcagcaggaagaactg
ctgcgccagagccaggaaagcgaagccattggcctgcggagcctgcagaaggtgcagggc
gacaggcgcctcttccaggagcgcgtcagcagcctgcagcgtgccttggcgcagctggag
aacgagaagcgggaggcagagcgctcgtccctgcgcctggagaaggacaggaacgccctc
aggaagaccctcgacaaggtggagcgggagaagctgaagacccacgaggactctgtgcgc
ctctctgctgaaaagggccgcctggacaggtccctcgccagtttggagcaggagctgaca
gaggctcagcagcagatccggctccttgaggcacaggtggcagagttggagcaggcccag
accagggtggactcctcaacccgacactggcaggacctgcagttggaggccgaacggctg
cacagctctcagctccaggcagaacacaccttggatgcccgggagagggcccaccggcag
cgggtcaagggccttgaggagcagatctccaccttgaaagagcagctgcaccaggaggta
cgcaagggccaagccaagttcaccccagcatccatcctctcggcaccctag
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integrated database retrieval system