Podarcis raffonei (Aeolian wall lizard): 128422563
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Entry
128422563 CDS
T09310
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04115
p53 signaling pathway
praf04210
Apoptosis
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128422563 (APAF1)
04115 p53 signaling pathway
128422563 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128422563 (APAF1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
APAF-1-like_WHD
ANAPC4_WD40
NBCH_WD40
CARD
RMC1_N
WD40_like
eIF2A
CARD_2
WDR54
AAA_16
Ge1_WD40
AAA_22
Nup160
SLFN-g3_helicase
DUF4441
Motif
Other DBs
NCBI-GeneID:
128422563
NCBI-ProteinID:
XP_053262668
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Position
10:42346445..42383374
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AA seq
1251 aa
AA seq
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MDMMARSYLLQNCEALERDIKTSYIMDHMIADEALTLLEEEKVKAQTTQRERAAMLVKII
LAKDNYAYVSFYNALLHEGYKDLAALLQDGIPILSPYNGKNSMDGVTSYVKTILCEGGVP
QRPVVFVTRPELANRIQQKLYKLKNDPGWVIVYGMAGCGKTVLAAEALRDHSLLKDCFPG
GVHWVSVGKQDKAGLLMKLQNLCLRLDQDFTYSQRPPLNIEEAKDRLRLLFLRKYPRSLL
VLDDIWDSWVLKSFDSHCQVLITSRDRSVTDSVAGKKYEVPVESGLTQEKSLEILSRFVN
IEITELPEKADCIVKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLPKDFKDYYRDLSVLQKDVKVPSKVFCILWDMETEEAEDILQEFVN
KSLLFCDRNGKSFQYYLHDLQLDFLTEKNRSQLQALHKKVVDQYKKCYKQYIPSQEDCMY
WYNFLAYHMASANMHNELCALMFSLDWIKTKTELVGPAHLIHEYAEYSQILDEKDAIARE
NFQEFLSLNGHLLGRQPFPDIVQLGLCQPESSEVYRQAKLKAQQEVENGSFYVEWINKKS
MKNMYRLVVRPHTDAVYHACFSQDRQRIASCGADKMLQVFKAGSGEKLLEVKAHDDEVLC
CTFSADDRFVATCSADRKVKVWNSRTGQLLCVFEEHAEQVNCCQFNNTNHRPFLLATCSN
DTFVKLWDLNKKQCRNTLFGHSSSVTHCRFSPDDKYVASCSADGTLKLWYAHSANELKTI
DIGDCFRNVDEYQDDVEVLVKCCSWSSNGTTVLVAAKNRLFLFDVKTSDLLTEVLISHHS
TIQYCDFCPNSQMVAVALSHYSVEIWNIESSSKIADCRGHMSWVHSVTFSLDGSLFLTSS
DDQTIRIWETKKVCESSAVVLKREIDVLFPVNEVFILAIDNMKHLQLINGFTGHTVYQTE
EQEPFISCCCLYEDLQTAAFGEKNGTVKVLNLSSGNILKSRTGHKEAVQHCQFTSDGKTL
ISSSDDSTIQVWNWQTEEFILLKGHKEPVKNFHLLKHSGLLSWSFDGTVKLWNTVTGELE
RDIICHEDTILSCVISPNTTMFSTTSADKTAKVWSFESSSVLHKLNGHDGCVRCCAFSLD
NELLATGDDNGEIRVWNVLRGELLHLYSHASKSEGESAYGGWVTDLRFSPDSQILVSSGG
CIQWWNVATGQLLQTFYTNGTDLKSLHVSPDFKVCVTVDNLGILYVLQIMK
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatatgatggctcgaagttatttgcttcagaattgcgaggcattggaaagagatatc
aagacttcttacataatggatcatatgattgcggatgaagcattaacattgctggaagag
gagaaagtaaaagcccagactacacagagagaacgagcagctatgttagtaaaaataatt
cttgccaaagataattatgcttacgtatccttctataatgcgctgcttcatgagggatac
aaagatcttgctgcccttctccaggatggcatccctattctttctccttataatggaaag
aattctatggatggagtaacttcatatgttaagacaattctctgtgaaggtggtgttcca
cagcgaccagtagtgttcgtcactcgtccagaactagcaaatagaattcaacagaaattg
tataaattaaaaaacgatccaggatgggttattgtttatggcatggcaggctgtggaaag
actgttttggcggcagaagcattacgtgaccacagtcttttgaaagattgtttcccagga
ggagtacattgggtttctgttgggaaacaagacaaagcaggtctgttaatgaaactccaa
aatctctgtctaagattagaccaggacttcacttactctcagaggccaccacttaatata
gaggaagctaaagatcgccttcgtttgctatttttgcgcaaatacccaaggtctctcttg
gtgcttgatgacatttgggattcctgggtattaaaatcctttgacagtcattgccaggtt
cttatcactagtagagataggagtgtaacagattctgtagctggcaagaaatatgaagtt
cctgtggaaagtggactaacacaggaaaaatcacttgaaatattatctcggtttgttaat
atagaaataacagaactaccagaaaaagctgattgtattgtaaaagaatgcaaaggttct
cctcttgtggtatctttgataggagcattattaagagatttccccaatcgctgggaatac
taccttaaacaacttcaaaataagcaatttaaaagaataaggaaatcatcatcttatgat
tatgaagcacttgatgaagccatgtccataagtgttgaaatgttgccaaaagatttcaaa
gactattacagagatctttctgtccttcaaaaggatgttaaagtgccttcaaaggtattc
tgtattctttgggatatggagacagaggaagccgaagacatactgcaagaatttgttaac
aaatctctcctgttctgtgatcggaatggaaaatcattccagtattacttgcatgatctc
cagcttgactttctaacagagaagaatcgctctcagcttcaagcactacataaaaaagta
gttgatcaatacaagaaatgttataaacagtatataccatcacaagaagactgcatgtac
tggtataattttctggcttaccatatggcaagtgccaatatgcacaatgaactctgcgct
ctcatgttttcactagactggattaaaaccaaaacagaattggtaggacctgctcattta
attcatgaatatgctgaatacagtcaaatattggatgaaaaggatgccattgcacgtgaa
aacttccaggaatttctatccttaaatgggcacctccttgggcggcaaccatttccagac
attgtacagctgggtctatgtcaaccagaaagttcagaagtctatcggcaagcaaagcta
aaagctcagcaagaagttgagaatggatcattttatgtggaatggataaataaaaaatcc
atgaagaacatgtaccgtttggttgtgcgtccacatacagatgctgtttaccatgcttgt
ttttcccaggatagacaaagaatagcttcatgtggagctgataaaatgctgcaggtgttt
aaagctggaagtggagaaaaacttttggaagtgaaagctcatgacgatgaagtgctgtgt
tgcaccttttcagcagatgacagatttgttgccacttgttcagcagatagaaaagtaaaa
gtctggaattcaagaacaggccagcttctgtgtgtgtttgaagaacatgcagagcaggtc
aactgctgccagtttaacaatacaaatcaccgcccatttctattggctacatgttcaaat
gacacttttgtcaaactctgggatttgaacaagaaacagtgtcgtaatacactgtttggt
cacagtagttctgttactcactgcagattttcaccggatgataagtatgtggctagttgc
tcagcagatggaactttaaagctttggtatgcacattcggcaaatgaactgaaaactatt
gacataggagactgctttagaaatgtggatgagtaccaggatgatgtggaagtcttagtg
aagtgttgctcctggtcatctaatggtactacagtgttggtggcagcgaaaaacaggctt
tttctttttgacgttaagaccagtgatttgttgacagaggttcttataagccaccacagc
actattcagtactgtgacttttgtcccaacagccagatggttgcagttgctttatcacat
tattctgttgagatatggaatattgaatcctcttccaaaattgctgactgccgaggacat
atgagttgggtccattctgtgacattttcacttgatgggtcattatttctcacttcttct
gatgaccagacaataaggatatgggagacaaagaaggtgtgtgagtcctctgctgttgtg
ttgaaacgtgaaatagatgttttgtttcctgttaatgaagttttcatcttggctattgac
aatatgaagcatctgcaactaattaatggcttcacaggccatactgtttatcagactgaa
gaacaggagcctttcattagctgctgttgcctatatgaagaccttcagactgcagcattt
ggagagaagaatggaacagtaaaggtattaaatctgtcaagtgggaatattttaaaatcc
agaactggacacaaggaagctgtacagcactgccagtttacttctgatgggaaaacactc
atttcaagctctgatgactcaactatacaggtgtggaattggcaaacagaggaatttatt
ctcctgaaaggtcacaaggaacctgtcaagaattttcaccttctaaaacactcagggctt
ctttcatggtcatttgatgggacagttaagctctggaacacagttacaggagaacttgag
agagatatcatttgccatgaagacaccattctttcttgtgtaatttcacccaataccact
atgttttccactacctctgctgacaagactgccaaggtatggagttttgaaagttcatcg
gttcttcataagctgaatggtcatgacggctgtgtgaggtgctgtgccttctcccttgac
aatgaattgttagccacaggagatgacaatggagaaatacgggtttggaatgtattgaga
ggagaactgcttcacctctattcccatgcttcaaagagtgagggagaatcagcctacgga
ggctgggtaacagaccttcgcttttcccctgatagtcagatacttgtttcttctggggga
tgcattcagtggtggaatgtagctactgggcaactcctacaaacattctatacaaatgga
acagaccttaaatcattacacgtttctccagatttcaaagtatgtgtgactgttgataat
cttggcattctttacgtgctacagattatgaaataa
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