KEGG   Limnobaculum zhutongyuii: EKN56_12925
Entry
EKN56_12925       CDS       T06157                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
prag  Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:prag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prag02044]
    EKN56_12925 (traD)
Secretion system [BR:prag02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   EKN56_12925 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 AAA_22 WbqC
Other DBs
NCBI-ProteinID: QBH97220
UniProt: A0A411WM42
LinkDB
Position
2883402..2885540
AA seq 712 aa
MSDRHVIETLLRPAVELYSAGAATAAGYICIAAPWSLALAPNVSYTVALGFATLAAVRAN
QGLRILRYRRNIRRLPRYVMTSAQVPLSYRQLFIGRGFRWEQKHTQRLHTCRRPEVEAYV
NPSTHYYYARQLEKLCEHRAFWLTKALSQDSILNPFRPLPPVGGSPLIHGIELNEIDVTL
PLGERVGHTLVMGTTRVGKTRLAELLITQDIRRGEVVIIFDPKGDADLLKRVYAETKRAG
REDEFYVFHLGWPDISSRYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIA
RALVELGRRPDYLQIARHVVNIDDLFIEYAKYYLPKHEPKAWEIIVQLTSKINDKNTPRN
LQGRDKHVVALEQYLAMAKVYDPILDGLRSAVRYDKTYFDKIVASLLPLLEKLTTGKTAQ
LLAPNYSDLNDSRPIFDWQQIIRKRGVVYVGLDALSDSEVASAVGNSMFADLVSVAGHIY
KFGVNDGLPEENQSKVPINLHCDEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEAR
IGNAAKAGQVIGNFNNLIMLRVRETATAELLTSQLHEVDILTNTVISGVTDSSDPFSKSD
FVSNTQDRVSSVKVPLIDPSAIIQLPKGQAFGLLEGGQLWKIRMPLPAAGNDEFMPDNIL
QIADYMQKNYRTGEQWWRGAVMPESSDSDQNSTEALLKALADDNASAEVDDV
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgagcgatcgtcacgttatcgaaaccctgcttagacccgccgtagagctttattctgcc
ggtgcggcaactgccgccgggtatatctgcatagccgccccttggtcactggcactcgcg
cctaacgtcagttacaccgtggcgctgggatttgcgactttagccgctgttcgcgctaat
caaggattgcggatattacgttaccggcgcaatatccgccgcctacctcgttatgttatg
accagcgctcaggtgcctttaagctatcgccagctatttattggccgtggctttcgttgg
gaacaaaaacatacccagcgactccatacctgtcgccgtcccgaggttgaagcctatgtt
aatccgagcactcactattattatgcccggcagctagaaaaattgtgtgagcatagagcc
ttctggctaaccaaagcgctatctcaggatagtattctcaacccttttcgccccctgcca
ccggttggcggtagccctctgatacatggcattgaattaaatgaaatagacgtaacgctc
cctcttggtgagcgcgtcggtcatactctggttatgggaacaacccgcgtcggcaaaacc
cgattagccgaattgcttattacgcaagatattcgtcggggtgaagtggtcattattttc
gatccaaaaggcgatgcagatttactcaagcgcgtatacgctgaaacaaaacgagcagga
cgtgaagatgaattttatgtctttcacctcggttggcctgatatttcgtctcgttacaac
gctgtcggccggtttggtcgtatctccgaagtggcatcccgcatagctgggcaactttcc
ggtgaggggaacagcgccgcattccgcgaattcgcctggcggttcgttaatattatcgcc
agagcattagtcgaacttggccgacgcccggactatctgcaaattgcccggcacgtcgtc
aatatcgacgatcttttcattgaatatgccaaatactacttaccaaagcatgaaccgaaa
gcgtgggaaatcatcgttcagcttacatcgaaaattaatgataaaaataccccacgtaac
cttcaaggaagggataagcacgttgttgctctggagcaatatcttgcgatggctaaggtt
tatgaccctatattggacggcctacgatctgccgttcgctacgataaaacctattttgac
aaaatagtagcatcactcttaccgttgttagaaaaactcactaccggtaaaacggcacag
cttttggcccctaactatagtgacctgaatgactctcgacctatctttgactggcaacag
attattcgtaaacgtggcgtggtctacgtgggccttgatgcactttccgattctgaagtg
gcttctgcggttggtaatagtatgtttgccgatctggtttctgtcgctggtcatatctac
aagtttggtgtcaatgatggcctacccgaagagaatcaatcaaaagtaccgatcaatctc
cactgtgatgaattcaatgagcttatgggtgatgagtttatcccattgatcaataaaggt
ggtggagctggaatacaggttacagcgtacactcaaacgctatcagatattgaagctcgt
ataggtaatgcggcaaaagccggtcaggttatcggcaactttaataacctgattatgcta
cgcgttcgtgaaacggctaccgcagagctactaacgagtcagcttcatgaagtcgatatt
ttgaccaacacggtgatctccggcgtcactgattcgtctgatccgttcagtaaaagcgac
tttgtcagtaatactcaagaccgtgtcagctccgtcaaggttccgttaattgatccctca
gccattatccaactaccgaaaggacaggcatttggtctgcttgaaggcggtcagctatgg
aaaattagaatgccactccctgccgccggtaatgatgaatttatgccagataatatctta
caaattgcagactatatgcagaagaactaccgaaccggcgagcaatggtggcgcggagca
gtgatgccagagagctcagattctgaccaaaatagtacagaagcgctactcaaagcacta
gcagatgataatgccagcgctgaggtcgatgatgtctga

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