Poecilia reticulata (guppy): 103457079
Help
Entry
103457079 CDS
T05149
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103457079
Glycosaminoglycan binding proteins [BR:
pret00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
103457079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
103457079
NCBI-ProteinID:
XP_008395240
LinkDB
All DBs
Position
LG21:79738..100992
Genome browser
AA seq
1481 aa
AA seq
DB search
MLQAAGLLLLLLAITSPAAGIRDGGAAAHSVESGGLLHLADLLKSSSKPSAWESSRRRSR
RSVFLQPGVRICSQESVDEVLASHQAYYQLRVCQEAVWEAFRIFLDRIPGTWEYQAWVRS
CQQEALCISDIARNFSSSEEHIGLIHRRMKNRRERRPETRAVTPAATQKTPELPGSEAPP
STSSSPPPAIIIITSAAPPSPVMDHTGPAGPDQEDPELPNLVPEGPEVHTVQFSVSLLDP
GYRQLLGEPDSPEYLDLATHLQDQMRLVFDRLPGFKAVSVLGIRETLEPDRAEGISVHYS
VVFENNIHHATSETTREPEASADSGLRDMLVKALQEKASLPVDLDSLNFQPEVIILPTPT
SSAAEEMDEPSEPDSHNEFKVFTPEPEVNKLHPPLTSKEKENDLVTLLDSTTVSHGEMIT
VTDGMALISDDPPASEDITDDSEEIYMIEPELSSQEQEEEELLIITHEIETIHQDETGEL
VRVYIPTPTLLLQGEADDPFVTSSPNLISEEDLSPVEKEGESPVFKPTAQIVFTAAIGNK
ELSEITTPSFKPADLTDQPSTEPAWIPKEEEDINALPHEEKLDLGFSKPEPSDVMDQESQ
DVRSLQTEVELLEPEEDTVILEVLRPNLEKVEVSEPGEVAVEMSESGEATFEVSVPEKEE
KPSEFITEVVDISNPATTPDTSETEAPEVSEPHQEVQQVLLMDKEVVDVSMQEKDPTKAS
ETKKQSIVESQDEVTEPEPVVLITEKDLVEPEELLPETDSDDTKPEVFTEQGVEDGVNIL
QPEKGIVEVTELEEEQIEKVIEVSLLIPQLEENLVEVPEKEEEVVLVDSKDEKVLERPGH
EVLKETLAEVPEEKGPDVTEERVPIFMEDRVPEVTKETVPRVTEEERVPKHIEDRFPERS
EESVTKVTQDMVPEDAEETVFKVTEQKVPKVTEENDNMGGVADRVSEPQEAVPELDREGV
RDKSVHVVKLQTEDVTEIANADFEDEMVVVASLDERLVDIAQPEPSSEKTEAIGDSKSPE
LETVSEPDKDRLDFLPDLPKGPEPEEEVIEPETKRDSTEPAIESIKILQTLESMEELHYR
EDSVQVVGEEPLDGSDELNPSAEDNLPIVPGLIYPITEDVDRTNIEVEREASAFRIPEPV
QTDLPIEAATSVSAAADAEPEVQSEDSGSTDNSSSKTQEEEMFVTRSPVSEALPAPPSAV
DLVQVPTPGPTEDSEDRSEPEPPVAPQVETADPESLTASPGGEEFSEELDQSNTPSKESV
DPASDLTSAAEEDAAPLRYLTTPTMTTASNRQELVVFFSLRLTNMDFSEDLFNNTSAEYR
TLENTLLDVLLPYLQANLTGFRKLEILNFRKGSVVVNSKMRFSRSVPYNVTEAVRCLLER
FCSPARRLQIDRSSLDVEPADRADPCRFLACGDSSHCVVDHRTQEAQCHCEPGFLAQQNR
SCRSVCELQPEFCPDGDCHVVPGRGAECRPRGGSQRSGLTR
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggctgctggactcctgctgctgctgctggccatcacgtcaccagcagctgga
atcagagatggcggagcggcggcgcacagcgtggagtctggaggattgctgcatctggct
gacctactgaaatcatctagcaaaccttcagcctgggagtcgagccggcgcagatcccgg
cggtcggtgtttctgcagcctggagtgagaatctgctcccaggagagcgtcgacgaagtt
ctggccagccaccaggcctactaccaactcagagtctgtcaggaggccgtgtgggaagcg
ttccggatcttcctggacagaattcccgggacgtgggaataccaggcgtgggtccgcagc
tgccagcaggaggcgctctgcatctctgacatcgccaggaacttcagcagctcggaggag
cacatcggcctgatccacaggaggatgaagaaccgcagagagagacgaccagagacacga
gcggtgactccggcagcaacacagaagaccccagaactcccaggttctgaagctccgccc
agcacgtcttcatcgcctccacctgccatcatcatcatcacctctgctgccccgcccagt
ccggtaatggaccacaccggaccggctggacccgaccaagaggacccggagctgcccaac
ctggttcccgagggtcctgaggtccacacggtgcagttcagtgtcagcctgctggacccg
ggctacaggcagctgctgggcgaaccggactcaccggagtacctggacctggcgacgcac
ctgcaggaccagatgcggctcgtcttcgaccgattgccgggcttcaaagccgtcagcgtt
ctggggatccgtgagacgctggaacctgacagggctgaaggaatctcggtccactactct
gtggtctttgagaacaacatccatcacgcaacctcagagacaaccagagaaccagaggcc
tctgctgactctggactcagagatatgttggtcaaggctttacaggagaaagcttctctg
ccagtcgacctggactccctgaacttccagccagaagttatcatcctcccaacaccaacg
tcatctgcagctgaagagatggatgagcccagtgaacctgattcccacaatgagtttaaa
gtcttcacccctgagcctgaggtgaataaacttcatcctcctctcacctcgaaggagaag
gaaaatgaccttgtaaccctgctggactccaccactgtctcacatggcgagatgatcacg
gtgactgatgggatggcactgatcagtgatgatcccccggcttcagaggacattactgat
gattcagaagaaatttacatgattgaaccagagctgtcgagccaggaacaagaggaagag
gaattgctcatcatcacacatgagattgaaaccattcatcaggatgaaacgggggaactt
gtgcgcgtctacatcccaaccccaacgctgcttcttcagggggaggcggacgatccattt
gtcacttcgtctcctaacctgatatcagaggaagacctcagtcctgttgaaaaagaggga
gaaagtcctgtgtttaaaccaacagctcagattgtattcactgcagccattggcaataag
gagctgtcggaaatcacaactccaagtttcaaacctgcagacctcacagaccagccatcc
acagagccagcatggatccctaaagaggaagaagacatcaacgctcttccacatgaagaa
aagctagatttaggtttttcaaaacctgaaccaagtgacgttatggaccaagaatcacag
gatgttagaagtttgcaaactgaagtagaactgctagagccagaggaagatacagtcatt
ctggaggttttaaggccaaaccttgagaaagtagaagtctcagaaccaggtgaagttgca
gttgaaatgtcagagtcaggtgaagcaacatttgaagtctcagtgccagaaaaagaagaa
aagccatcagagtttatcacggaagtagttgacatttcaaatccagccacaacacctgac
acttcagagacagaagcacctgaagtttcagagccacaccaagaagttcaacaagtgtta
ctaatggacaaagaagtagtggatgtttcaatgcaagaaaaagatccaactaaagcatca
gagacaaagaaacagtcgattgtcgaaagtcaggacgaagttacagagccagaacctgtg
gttcttattacagagaaggaccttgttgaaccagaagaactgcttccagagacggactct
gatgataccaaacctgaggttttcacagagcaaggtgtagaagacggtgtcaacattttg
caaccagaaaaaggaatagttgaagttacagaactagaagaagaacagatagaaaaagta
attgaggtgtcgcttttaattcctcaactagaggaaaatctggtggaggtcccagaaaaa
gaggaagaggtggtgcttgttgactccaaagatgaaaaagttttagagagacctggtcat
gaagttctgaaagaaacgttagctgaagtccctgaagaaaagggtcctgatgtcacagag
gaaagggttcccatatttatggaggacagagttcctgaagtcaccaaggaaaccgttccc
agggtcaccgaggaagagagagttcccaaacatatagaagataggtttcctgagcgctca
gaagaaagtgttactaaagttacacaggacatggtccctgaagatgctgaggaaactgtg
ttcaaagttacagagcaaaaggttcccaaagttacggaggagaacgacaacatgggtgga
gttgctgatagagtttctgaaccacaggaagcagttcctgagttggatagagaaggagtt
agagacaaatcagtccatgtggtgaagcttcaaacagaagatgtcactgaaattgctaat
gcagattttgaggatgaaatggttgtagttgcctcacttgatgagaggctggtggacatt
gcacagccagaaccttcttcagagaagactgaagccataggtgactcaaaaagtccagaa
ctggagacagtatcagaaccagacaaagaccgattggacttcttaccagacttacctaaa
ggtccagaaccagaagaggaggtcatagagccagaaacaaagagagattctacagaacca
gctattgagtcaatcaaaatcctccagactttggaaagcatggaagaacttcactacaga
gaggatagtgttcaggtagtgggggaagagccactggatggttctgatgaactcaaccca
tcagcggaagataatctacccatcgtaccaggactcatctacccaatcacagaggacgtt
gatagaaccaacatagaggtggagagagaagccagtgccttcagaataccagaacctgtc
cagactgatctacccattgaagcagcaacatctgtctcagccgcagcagatgcagagcca
gaggttcagtcagaggattctggatcgacagataactcttcatcaaagacacaagaagaa
gaaatgtttgtaactcgtagcccagtctcagaagcccttcctgcacctccatctgctgtc
gacctggttcaagtaccaacacctggcccgactgaggactctgaggacagaagtgaacca
gaaccacctgttgctccccaggtggaaacggcagatcctgaaagcctcaccgcctctcca
ggtggggaggagttttctgaggaactggaccagagcaacactcccagtaaggagtcagtg
gaccctgccagtgatctgacctctgcagcagaggaagatgccgctcctctaagatacttg
accacgcccaccatgaccaccgccagcaacaggcaggagctggtggtgttcttcagcctg
cgcctcaccaacatggacttctctgaagaccttttcaacaacacctcagcagagtacaga
accctggagaacactcttctagatgtgctgctgccgtacctgcaggccaacctgacgggc
ttcaggaaactggagatcctgaacttcaggaagggcagcgtggtggtcaacagcaagatg
cgcttctcccgctccgtgccctacaacgtcaccgaggccgtccgctgcctgctggagcgg
ttctgttcccccgccaggaggctccagatcgaccgcagctcgctggacgtggagccagct
gatcgggccgatccgtgccggttcctggcctgcggagactcatcccactgcgtggttgac
caccggacccaggaggcccagtgccactgcgaaccgggcttcctggctcaacagaaccgg
tcctgtcggagcgtctgtgagctgcagcccgagttctgtccagacggggactgtcacgtg
gttccaggccgaggagccgagtgcagacccagaggcggatctcagcggtccggcctgacc
aggtag
DBGET
integrated database retrieval system
