Poecilia reticulata (guppy): 103475103
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Entry
103475103 CDS
T05149
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103475103 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103475103 (exosc5)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103475103 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103475103
NCBI-ProteinID:
XP_008424727
UniProt:
A0A3P9PWF5
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Position
LG13:30496938..30505548
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AA seq
236 aa
AA seq
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MTSFSCDKHRLHREGGMMEVSPSSTVSLREFGCEQTLLSRPDGSASFVQGDTSVMAGVYG
PAEVKISKEIYDRATLEVLVHPKVGLPGVRERSQEQCVRETCEASLLLSLHPRSSLTLIL
QVLHDDGALLSCCLNAACMALMDAGLSMSCLFCGVTCAISADGEIITDPTAAQEKESRAL
MSFAIDGKERRVMMSSTKGSFSVHELQQCVAVSQKASEKIFQFYRDSVRRRYSKNL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatttagctgcgacaaacatcgtctccaccgtgaaggcggcatgatggaagtc
tctccttcttcaactgtttctctcagagagttcgggtgtgaacaaaccttactgtcccgt
cctgatggatcggcgtccttcgttcagggagacaccagtgtgatggcgggagtctacgga
cctgctgaggtcaaaatcagcaaggaaatctacgaccgggcaaccctggaggttctggtt
catcccaaagtggggctgccaggtgtgagggagcgatcacaggaacaatgtgtgcgggaa
acgtgtgaggcgtctctgcttttatctctccatcctcgctcgtcgctcacgctcatcctg
caggtgctgcacgacgacggcgccctcctgtcctgctgtctgaacgcagcctgcatggcc
ctgatggacgccggcttgtctatgagttgcctgttttgtggagtgacctgcgccatcagc
gcagacggtgaaatcatcacagacccgactgcagctcaggaaaaggaaagtcgagctttg
atgtccttcgccatcgacggcaaagagcgcagagtgatgatgtcatcaaccaaaggctcg
ttctcggttcatgagctgcagcagtgcgtagccgtcagtcaaaaagcgtcagagaagatc
ttccagttctacagggactccgtcagacgccgatactccaagaacctttga
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