Pseudomonas rhizosphaerae: LT40_15660
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Entry
LT40_15660 CDS
T03339
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00250
Alanine, aspartate and glutamate metabolism
prh00310
Lysine degradation
prh00350
Tyrosine metabolism
prh00650
Butanoate metabolism
prh00760
Nicotinate and nicotinamide metabolism
prh01100
Metabolic pathways
prh01120
Microbial metabolism in diverse environments
Module
prh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LT40_15660 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LT40_15660 (gabD)
00310 Lysine degradation
LT40_15660 (gabD)
00350 Tyrosine metabolism
LT40_15660 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LT40_15660 (gabD)
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LT40_15660 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LT40_15660 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LT40_15660 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIS18744
UniProt:
A0A089YSY0
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Position
complement(3463541..3464983)
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AA seq
480 aa
AA seq
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MQLKDTSLFRQQAYIDGAWLGADSGQAIKVSNPATNEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERSNKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRVYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAERAGIPKGVFSVVTGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAEKLKVAVGKLKIGNGLEEGTTTGPLIDDKAVAKVKEHIADAVGKGATVLTGGNA
LQGNFFEPTVLVNVSKDAAVAKEETFGPLAPLFRFQDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagacacctcgttgttccgccagcaagcctatatagatggtgcgtggctg
ggcgccgacagtgggcaggccatcaaggtcagcaaccctgctaccaacgaaatcctcggc
accgtgccgaaaatgggcgccgctgaaacgcgtcgcgccatcgaggctgccgacaaggcg
ctgccggcctggcgtgcgttgaccgccaaggagcgctcgaacaagctgcgccgctggttc
gaactgatgatcgagaaccaggatgacctcgcacgtttgatgacgctggagcagggcaag
ccactggccgaggccaagggcgaaatcgtctacgcggcgtcgttcatcgaatggtttgcc
gaggaagccaagcgcgtctacggcgacaccattcccggtcaccagccggacaagcgcctg
atcgtgatcaagcagcccatcggcgtgaccgcagccatcacaccgtggaacttccccgcc
gcgatgatcacccgcaaggcgggtcccgcgctggctgccggttgcaccatggtgctcaag
cctgcctcgcagacgccgttctcggcgctggcgctggctgaattggccgagcgcgcgggt
attccgaagggtgtgttcagtgtcgtgaccggcagcgccggcgacattggcagcgagctg
accagcaacccgatcgtgcgcaagctgagtttcactggctcgaccgagatcggtcgccag
ttgatggccgaatgcgccaaggacatcaagaaggtctcgctggagttgggcggcaacgcg
cctttcatcgtgtttgacgatgccgacctggacaaggcggtcgagggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtgtgcgccaaccgcatctatgtgcaggacggc
gtgtatgacgcgttcgccgagaagctaaaggtggcggtgggcaagctcaagatcggcaac
ggtctggaagaagggaccaccacgggcccgctgatcgacgacaaggccgtggccaaggtc
aaggaacacattgccgatgccgtgggcaagggcgcaaccgtgctgaccggtggcaacgca
ctgcagggcaacttcttcgagccgaccgtattggtcaacgtctccaaggacgccgccgtg
gccaaggaagaaaccttcggtccgctggcgccgttgttccgcttccaggacgaggccgaa
gtgatcgccatgtccaacgacaccgagttcggcctggcgtcgtacttctatgcccgcgac
atgagccgggtgttccgtgtcgccgaagcgctggaatacggcatggtcggtatcaacacc
ggtctgatcagcaacgaagtggcgccgttcggcggcatcaaggcttcgggcctgggccgc
gaaggctccaaatacggcatcgaagactatctggaaatcaaatacctctgcatttcggtg
taa
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