Pseudomonas rhizophila: CRX69_11800
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Entry
CRX69_11800 CDS
T09779
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRX69_11800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_11800
Enzymes [BR:
prhz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CRX69_11800
DNA repair and recombination proteins [BR:
prhz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CRX69_11800
Prokaryotic type
CRX69_11800
BRITE hierarchy
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVU75847
LinkDB
All DBs
Position
2570127..2570819
Genome browser
AA seq
230 aa
AA seq
DB search
MTADDRIKLEPSWKQALRAEFDQPYMAELREFLRREYAAGKEIYPPASLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLLLNTTMTVERANANSHAGKGWQHFTDRVIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRANKFLEQQGEAPIDWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaagcaagccctgcgtgccgag
ttcgaccagccctatatggcagagttgcgtgaatttctgcgtcgggagtacgccgccggc
aaggaaatttacccaccggcatcgttgattttcaatgccctcaactccacgccgctggac
aaggtcaaggtcgtgatcctcggccaggacccttatcacggcccaggccaggctcatggt
ttgtgcttttcagtgcagccgggcgtgccggcgccgccctcgctggtgaacatctacaag
gaattgaaacgcgatctgaatatcgacatcccgaatcacggctacctgcaaagttgggcc
gaccagggggtgttgctgctcaacaccaccatgaccgtggagcgtgccaatgccaactcc
cacgcaggcaagggatggcagcactttactgatcgggtcattgaagtggtcagtgagcac
cagccgcatttggtctttctactgtggggcgctcatgcccaaggcaagcagaagctgatc
gatgccaccaaacacttggtgctgacctccgtccacccgtcgccgctgtcggcttaccgc
ggtttcctggggtgcgggcatttcagtcgggccaacaagtttcttgagcaacagggcgaa
gcgccgattgattggcggttgccgccggtttaa
DBGET
integrated database retrieval system
