Pedobacter riviphilus: H9N25_05275
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Entry
H9N25_05275 CDS
T08657
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
prk
Pedobacter riviphilus
Pathway
prk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9N25_05275 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prk03400
]
H9N25_05275 (recR)
DNA repair and recombination proteins [BR:
prk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H9N25_05275 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9N25_05275 (recR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QNR85863
LinkDB
All DBs
Position
1260896..1261513
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AA seq
205 aa
AA seq
DB search
MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVNQFGNTFIKLKQQIKHCST
CHNISDYAVCEICTSPKRDKETICVVEDTRDVMAIENTGQYFGVYHVLGGLISPMDGIGP
SDLFIDGLIVRMAAGGIKEVILALSPNMEGDTTLFYLYKRLKEFNVPVTTIARGIAFGGE
LEYTDEITLGRSIVTRVPYETAMMK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcatccaaactgctcgaagatgcggtaaacgaattctcaaaacttcctggt
gtagggcaaaaaacggctttacgtttggtattacatcttttaaacaaagagcaggaggag
gtaaaccagtttggcaatacttttataaaacttaaacagcagattaaacattgcagcact
tgccataacatttccgattatgcagtatgtgagatctgtacttcgccaaaacgtgataaa
gaaaccatttgtgtggtagaagatacccgcgatgtgatggccattgaaaataccggtcaa
tattttggggtttaccatgttttgggcggcttaatttctccaatggatggcattggtcct
tccgatctgtttattgatggattaatagtaagaatggcggcaggagggattaaagaagta
attttggcattgagtccgaatatggagggcgataccacattgttttacctgtataaaaga
ttaaaggagtttaatgttccggtaacgaccattgcacggggtattgcttttggcggcgag
ctggaatatacagatgaaattacactcggcagatcgattgtaacccgtgtgccttacgaa
actgcaatgatgaaatag
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