Prevotella sp. oral taxon 299: HMPREF0669_01002
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Entry
HMPREF0669_01002 CDS
T02809
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pro
Prevotella sp. oral taxon 299
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pro03032
]
HMPREF0669_01002
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_01002
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0669_01002
DNA replication proteins [BR:
pro03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0669_01002
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0669_01002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
EFC71297
UniProt:
D3IC48
LinkDB
All DBs
Position
unnamed:complement(991493..993466)
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AA seq
657 aa
AA seq
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MSENQNIENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGY
CTDIEVTINEDNSITVQDNGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGSYKVSGGL
HGVGVSCVNALSTHMKSQVFRDGKIYQQEYEQGKPLYSVKVVGETNLRGTRQQFWPDPSI
FTTTLYKWDIISRRMRELAYLNAGVRITLTDLRLDEEGKIRREEFYAQDGLKAFARYIDR
HRTHLFDDVIYLKTEKNNVPIEVAVMYNTDYSENIHSYVNNINTIEGGTHLTGFRMALTR
TLKAYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG
AVQQAVGEALADYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMTGGGLPGKL
ADCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYCQAILPLRGKILNVEKVMWHKVFESESV
MNIIQSIGVRFGVEGEDDKEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVI
QEGHLYIATPPLYLCSYKNKEKEYCYTEQQRQAFIDRHTEGKDDSKSIHVQRYKGLGEMN
PEQLWETTMNPQTRLLKQVTIENAAEADEIFSMLMGDDVEPRREFIEQNATYANIDA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatcaaaacatagaaaataactattcggcgagtaacattcaggtgctcgaa
ggattagaagcagttcgaaaacgtcctgcaatgtatataggagacattagcgaaaagggt
ttacatcacctcgttaatgaaacagtagataactctattgacgaagcaatggcaggttat
tgtactgatattgaggttacaatcaacgaagataactcaataactgtgcaagataatggt
agaggtattcctgtagatatgcacgaaaagttgcataagtcagctcttgaagtagttatg
accgtgttacatgcgggcggaaagtttgataaaggctcgtataaagtaagtggtggactt
catggagtgggtgtttcttgtgttaatgctttgtcaactcacatgaaatctcaagtattt
cgtgatggaaagatttatcaacaagaatacgaacaaggtaaacctctctattctgtaaag
gtagttggagagacaaatcttcgtggaacacgtcaacaattctggccagatccaagcata
ttcactactacattatataaatgggacatcatttcacgtcgtatgcgtgagcttgcttac
ttgaatgcaggcgttagaataactctaaccgacttgcgtttagatgaagaaggcaaaata
cgtagagaggaattctatgctcaagacggcttgaaagcatttgcaagatacatcgataga
cacagaacacatctttttgacgatgttatttatcttaaaactgaaaagaataacgtgcca
atcgaagtggcagtgatgtacaataccgattattctgagaacatacactcgtatgttaac
aacattaatacaatcgaaggtggtacccatctcactggctttagaatggctttgacacgt
actttgaaagcatatgcagacaatgatcctgtaatttcaaagcaaatagaaaaagcaaag
attgagattgcgggcgaagactttagagaaggactcacagctgttatctctatcaaagta
gcagagccacaattcgaaggtcaaaccaaaacaaaactgggcaatagtgaggtctctgga
gcagtacaacaagcggttggagaagcattagccgattatcttgaagagcatccaaaggaa
gcaaagcttatatgtgataaggttatactagccgctaccgcacgtattgcagcacgaaag
gcaagagaaagcgttcaaagaaagaacccaatgactggcggaggcttacctggtaagttg
gcagactgctctaataaagacccaaaaacatccgaaatattcctcgttgagggtgattct
gcgggcggttcagctaaacaaggacgtgatagatactgccaagcgattctacctttgcgt
ggaaagatacttaatgtcgaaaaagttatgtggcataaggttttcgaaagcgagtcggta
atgaacattattcaaagtattggtgttcgtttcggagtagaaggagaagacgataaagaa
gcaaatatcgacaagttgcgttacgataagattattattatgaccgacgccgacgtcgat
ggatcgcatatcgacacccttatcatgacacttttctatcgtttcatgcctaaagtgata
caagaaggtcacctttatattgcaactccacctctatacttgtgtagttacaagaacaaa
gagaaagaatattgctatacagagcaacaaagacaagcctttattgatagacatacagag
ggcaaagacgattcaaagagcatccacgtacaacgctataaaggtcttggagagatgaat
ccagagcaattatgggaaacaactatgaaccctcaaacacgacttttaaagcaagttaca
attgagaacgctgccgaagcagatgaaattttctcaatgttgatgggagatgacgttgaa
ccacgtcgtgaatttatagaacaaaatgctacttatgcgaatatagacgcataa
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